RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ZC3H15Q8WU90 426 aaKnown RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 MTG1Q9BT17 334 aaPredicted RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 THTPAQ9BU02 230 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 CPSF2Q9P2I0 782 aaKnown RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 USP17L7P0C7H9 530 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 AXLP30530 894 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 SCNN1GP51170 649 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 RGS9BPQ6ZS82 235 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 CRYGNQ8WXF5 182 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 RPRD1AQ96P16 312 aaPredicted RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 RNF157Q96PX1 679 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 MYCBPQ99417 103 aaPredicted RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 MRPL45Q9BRJ2 306 aaKnown RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.24
TCF3-220ENST00000611869 Q9H521 79 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 STXBP5LQ9Y2K9 1186 aa13.58□□□□□ -0.24
TCF3-220ENST00000611869 MYH1P12882 1939 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 RNF103O00237 685 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 ARIH2O95376 493 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 TPH1P17752 444 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 DUSP28Q4G0W2 176 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 PPTC7Q8NI37 304 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 ELOVL4Q9GZR5 314 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 AP3B1O00203 1094 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 PSMD3O43242 534 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 CHEK2O96017 543 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 MYL2P10916 166 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 VEPH1Q14D04 833 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 POLNQ7Z5Q5 900 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 MTDHQ86UE4 582 aaKnown RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 SHCBP1Q8NEM2 672 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 SH3GL2Q99962 352 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 TUBGCP4Q9UGJ1 667 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 LRCH4O75427 683 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 ZNF189O75820 626 aaPredicted RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 CFHP08603 1231 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 PTPN1P18031 435 aaKnown RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 BDNFP23560 247 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 ANKRD20A8PQ5CZ79 823 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 EP400NLQ6ZTU2 488 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 TAS2R42Q7RTR8 314 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 TIAM2Q8IVF5 1701 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 ZC3H3Q8IXZ2 948 aaKnown RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 EFHBQ8N7U6 833 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 LRRC40Q9H9A6 602 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 ADA2Q9NZK5 511 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 WDR27A2RRH5 827 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 MANSC4A6NHS7 340 aaPredicted RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 ZBBXA8MT70 800 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 E5RI56 91 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 EDIL3O43854 480 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 NOL3O60936 208 aaKnown RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 CYP1A1P04798 512 aaPredicted RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 UNGP13051 313 aaPredicted RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 MGAT1P26572 445 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 GLRBP48167 497 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 DCAF12L1Q5VU92 463 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 PRPF39Q86UA1 669 aaKnown RBP13.57□□□□□ -0.24
TCF3-220ENST00000611869 TMEM192Q8IY95 271 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 PGLYRP2Q96PD5 576 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 GCNAQ96QF7 691 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 NAT9Q9BTE0 207 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 NOD2Q9HC29 1040 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 TRPC7Q9HCX4 862 aa13.57□□□□□ -0.24
TCF3-220ENST00000611869 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 SNX2O60749 519 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 ITGAVP06756 1048 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 AVPR1AP37288 418 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 GRM5P41594 1212 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 RPL10AP62906 217 aaKnown RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 CRADDP78560 199 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 EFEMP1Q12805 493 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 LPPQ93052 612 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 BHMTQ93088 406 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 A0A0G2JLL6 359 aaPredicted RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 FOXO6A8MYZ6 492 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 O00370 1275 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 CLDN5O00501 218 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 IRF1P10914 325 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 GFAPP14136 432 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 RPA3P35244 121 aaPredicted RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 RABGAP1LQ5R372 815 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 ZNF572Q7Z3I7 529 aaPredicted RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 PRRT2Q7Z6L0 340 aaPredicted RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 BORCS6Q96GS4 357 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 FBXL18Q96ME1 805 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 SYT17Q9BSW7 474 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 KDM4CQ9H3R0 1056 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 XPNPEP3Q9NQH7 507 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 IARS2Q9NSE4 1012 aaKnown RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 MSCO60682 206 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 NQO1P15559 274 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms