RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 EPB41L4BQ9H329 900 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 FBXO6Q9NRD1 293 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 EPS15L1Q9UBC2 864 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SSX2IPQ9Y2D8 614 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 C10orf71Q711Q0 1435 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 WDR27A2RRH5 827 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 MOCS2O96007 188 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 PIGRP01833 764 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 NCAM1P13591 858 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 AKAP5P24588 427 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 OGDHQ02218 1023 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SPRED3Q2MJR0 410 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SV2CQ496J9 727 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 FASTKD1Q53R41 847 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 FBXO47Q5MNV8 452 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 TDRPQ86YL5 185 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 RNF135Q8IUD6 432 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 ST13P4Q8IZP2 240 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 RYBPQ8N488 228 aaPredicted RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 FNIP1Q8TF40 1166 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 HTR3CQ8WXA8 447 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 PPWD1Q96BP3 646 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 APOL2Q9BQE5 337 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 IPO11Q9UI26 975 aaKnown RBP8.98□□□□□ -0.97
LIG4-204ENST00000611712 AFG3L2Q9Y4W6 797 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 SNCAIPQ9Y6H5 919 aa8.98□□□□□ -0.97
LIG4-204ENST00000611712 BTAF1O14981 1849 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 GOLGA8QA0A0J9YX86 632 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 GOLGA8OA6NCC3 632 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 C3orf70A6NLC5 250 aaPredicted RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 GOLGA8NF8WBI6 632 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 GPR25O00155 361 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 TRDMT1O14717 391 aaKnown RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 GRIN3BO60391 1043 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 MSCO60682 206 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CETPP11597 493 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 KCNA3P22001 575 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CRADDP78560 199 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 USP10Q14694 798 aaKnown RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 TAF12Q16514 161 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 SH2D4BQ5SQS7 431 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 FAM182AQ5T1J6 154 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 SNX30Q5VWJ9 437 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 RHBDF2Q6PJF5 856 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 TSHZ1Q6ZSZ6 1077 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 ZNF526Q8TF50 670 aaPredicted RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 HDAC11Q96DB2 347 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CMTM5Q96DZ9 223 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 ADAM7Q9H2U9 754 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 TASP1Q9H6P5 420 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 DDIT4Q9NX09 232 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 BTBD7Q9P203 1132 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 RABGEF1Q9UJ41 708 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 SLC39A10Q9ULF5 831 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 HES2Q9Y543 173 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 GNAT1P11488 350 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 ARF4P18085 180 aaPredicted RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 KCNA4P22459 653 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 COPAP53621 1224 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 NRLP54845 237 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 ZNF280AP59817 542 aaPredicted RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 BST1Q10588 318 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 NOMO1Q15155 1222 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 GRIK4Q16099 956 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 N4BP2L1Q5TBK1 243 aaPredicted RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 C16orf46Q6P387 395 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CES3Q6UWW8 571 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 SCN4BQ8IWT1 228 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 RFWD2Q8NHY2 731 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 SLC35B2Q8TB61 432 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 ZNF398Q8TD17 642 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 MAGEC3Q8TD91 643 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 VPS39Q96JC1 886 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 NAT9Q9BTE0 207 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 PDGFCQ9NRA1 345 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 DCDC2Q9UHG0 476 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 TAGLN3Q9UI15 199 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 TNRC6CQ9HCJ0 1690 aaKnown RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 SOWAHBA6NEL2 793 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 RRN3P2A6NIE6 340 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 KCNK1O00180 336 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CXCL11O14625 94 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 AIM2O14862 343 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 TRPA1O75762 1119 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 RGS20O76081 388 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 FAM200BP0CF97 657 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CCDC130P13994 396 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 PAMP19021 973 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 MGAT1P26572 445 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 IL1R2P27930 398 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 PNPLA4P41247 253 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 WNT7BP56706 349 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 STX1BP61266 288 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 KLF1Q13351 362 aaPredicted RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 ACVR2BQ13705 512 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 KPNB1Q14974 876 aaKnown RBP8.97□□□□□ -0.97
LIG4-204ENST00000611712 ADGRD1Q6QNK2 874 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 CCNJLQ8IV13 435 aa8.97□□□□□ -0.97
LIG4-204ENST00000611712 SLC4A11Q8NBS3 891 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms