RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 WASH3PC4AMC7 463 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 PPP6R2O75170 966 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 TBX18O95935 607 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 DLATP10515 647 aaKnown RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 MAOBP27338 520 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 TUBP50607 506 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 ATXN3P54252 364 aaPredicted RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 CDH8P55286 799 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 MYL6P60660 151 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 CYP24A1Q07973 514 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 BYSLQ13895 437 aaKnown RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 PSMD6Q15008 389 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 E2F4Q16254 413 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 SNRNP35Q16560 246 aaKnown RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 ANO4Q32M45 955 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 HECTD3Q5T447 861 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 SLC36A4Q6YBV0 504 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 GPRIN1Q7Z2K8 1008 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 SLCO6A1Q86UG4 719 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 PDZD3Q86UT5 571 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 MARCH9Q86YJ5 346 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 FUKQ8N0W3 1084 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 BAHD1Q8TBE0 780 aaPredicted RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 ZNF419Q96HQ0 510 aaPredicted RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 MRGPRX1Q96LB2 322 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 SMOQ99835 787 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 SNX25Q9H3E2 840 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 IL21RQ9HBE5 538 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 AGPAT3Q9NRZ7 376 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
FDPS-220ENST00000611010 CACNA2D2Q9NY47 1150 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 CCDC39Q9UFE4 941 aa12.48□□□□□ -0.41
FDPS-220ENST00000611010 A8MXQ7 604 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 KCNJ18B7U540 433 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 NEDD8-MDP1E9PL57 170 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
FDPS-220ENST00000611010 RTN3O95197 1032 aaPredicted RBP12.47□□□□□ -0.41
FDPS-220ENST00000611010 STAU1O95793 577 aaKnown RBP12.47□□□□□ -0.41
FDPS-220ENST00000611010 CISD3P0C7P0 127 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 CMA1P23946 247 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 STAT6P42226 847 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 CASP4P49662 377 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 TYRO3Q06418 890 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 ORC1Q13415 861 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 GRAMD4Q6IC98 578 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 CCNI2Q6ZMN8 369 aaPredicted RBP12.47□□□□□ -0.41
FDPS-220ENST00000611010 TRMT11Q7Z4G4 463 aaKnown RBP12.47□□□□□ -0.41
FDPS-220ENST00000611010 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 PDZD8Q8NEN9 1154 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 FUCA2Q9BTY2 467 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 KLF16Q9BXK1 252 aaPredicted RBP12.47□□□□□ -0.41
FDPS-220ENST00000611010 KRT82Q9NSB4 513 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 PCOLCE2Q9UKZ9 415 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 SH3BP1Q9Y3L3 701 aa12.47□□□□□ -0.41
FDPS-220ENST00000611010 MDM4O15151 490 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 CLIC2O15247 247 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 TLR5O60602 858 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 CUTAO60888 179 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 PTMAP06454 111 aaKnown RBP12.46□□□□□ -0.41
FDPS-220ENST00000611010 CCDC130P13994 396 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 TYRP14679 529 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 CYP2J2P51589 502 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 TNNC1P63316 161 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 EHHADHQ08426 723 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 SURF1Q15526 300 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 PLEKHG6Q3KR16 790 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 HS1BP3Q53T59 392 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 BTBD8Q5XKL5 378 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 RBM43Q6ZSC3 357 aaKnown RBP12.46□□□□□ -0.41
FDPS-220ENST00000611010 HTR3DQ70Z44 454 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 RABEPKQ7Z6M1 372 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 CHPFQ8IZ52 775 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 PDILTQ8N807 584 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 CCDC127Q96BQ5 260 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 CRELD1Q96HD1 420 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.41
FDPS-220ENST00000611010 NMUR1Q9HB89 426 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 DMAP1Q9NPF5 467 aaPredicted RBP12.46□□□□□ -0.41
FDPS-220ENST00000611010 USP36Q9P275 1121 aaKnown RBP12.46□□□□□ -0.41
FDPS-220ENST00000611010 NXF1Q9UBU9 619 aaKnown RBP12.46□□□□□ -0.41
FDPS-220ENST00000611010 FNDC3AQ9Y2H6 1198 aaKnown RBP12.46□□□□□ -0.41
FDPS-220ENST00000611010 RAXQ9Y2V3 346 aa12.46□□□□□ -0.41
FDPS-220ENST00000611010 HELZ2Q9BYK8 2649 aaKnown RBP12.46□□□□□ -0.42
FDPS-220ENST00000611010 KNL1Q8NG31 2342 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 CABIN1Q9Y6J0 2220 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 HHLA1C9JL84 531 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.421e-8■□□□□ 8.3
FDPS-220ENST00000611010 CYP26A1O43174 497 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 ZNF217O75362 1048 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 DKK1O94907 266 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 VNN1O95497 513 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 FAM163BP0C2L3 166 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 TNNI1P19237 187 aa12.45□□□□□ -0.42
FDPS-220ENST00000611010 SLC14A1Q13336 389 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms