RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 DHDDSQ86SQ9 333 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 IRF2BP1Q8IU81 584 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 GRIP2Q9C0E4 1043 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 GANQ9H2C0 597 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 LRRC19Q9H756 370 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 PLEKHA5Q9HAU0 1116 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 SLC39A10Q9ULF5 831 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 KIF20BQ96Q89 1820 aa9.41□□□□□ -0.9
COL25A1-208ENST00000610288 SDR42E2A6NKP2 422 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 EDF1O60869 148 aaKnown RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 MYL4P12829 197 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TFE3P19532 575 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 SSTR1P30872 391 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RPL10AP62906 217 aaKnown RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 CACNB2Q08289 660 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 KRT33BQ14525 404 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ZNF235Q14590 738 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 LIN52Q52LA3 116 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 SLC47A2Q86VL8 602 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 MCOLN2Q8IZK6 566 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 SNX19Q92543 992 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 CCDC126Q96EE4 140 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 WNK4Q96J92 1243 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 EGFL8Q99944 293 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 COG4Q9H9E3 785 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TBX20Q9UMR3 447 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 SCAF8Q9UPN6 1271 aaKnown RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 CNTNAP4Q9C0A0 1308 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 SULT1E1P49888 294 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ZNF618Q5T7W0 954 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RNF220Q5VTB9 566 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 MFSD14CQ5VZR4 134 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 APPL2Q8NEU8 664 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 DQX1Q8TE96 717 aaKnown RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ELMO2Q96JJ3 720 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 PPP1R2P1Q96PQ5 205 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TUBGCP5Q96RT8 1024 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TMEM109Q9BVC6 243 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TARS2Q9BW92 718 aaKnown RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RNPEPQ9H4A4 650 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 GIN1Q9NXP7 522 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ATP6V1HQ9UI12 483 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RABL2BQ9UNT1 228 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 DMTF1Q9Y222 760 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RPS6KL1Q9Y6S9 549 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TCHHQ07283 1943 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 HEATR9A2RTY3 570 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 MAGEB2O15479 319 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 DYNC1LI2O43237 492 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 GRAP2O75791 330 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 PDGFRBP09619 1106 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ZNF23P17027 643 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 HADHAP40939 763 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ELK3P41970 407 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TCHHL1Q5QJ38 904 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ANGEL2Q5VTE6 544 aaKnown RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 TTC27Q6P3X3 843 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 NCCRP1Q6ZVX7 275 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 CBWD2Q8IUF1 395 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 P3H2Q8IVL5 708 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 CCDC60Q8IWA6 550 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RASGEF1CQ8N431 466 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 PYDC1Q8WXC3 89 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ACSF2Q96CM8 615 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RMDN1Q96DB5 314 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ATG4CQ96DT6 458 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 ASIC4Q96FT7 647 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 DCUN1D5Q9BTE7 237 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 RIOX1Q9H6W3 641 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 CHST7Q9NS84 486 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 KLHL20Q9Y2M5 609 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 GRIN2DO15399 1336 aa9.4□□□□□ -0.9
COL25A1-208ENST00000610288 C5orf60A6NFR6 353 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 IRF6O14896 467 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 LSM8O95777 96 aaKnown RBP9.4□□□□□ -0.91
COL25A1-208ENST00000610288 GYS1P13807 737 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 IFNA8P32881 189 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 SLC1A6P48664 564 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 PDK2Q15119 407 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 FAXCQ5TGI0 409 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 KDELC2Q7Z4H8 507 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 CBWD1Q9BRT8 395 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 HSD3B7Q9H2F3 369 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 FBXO28Q9NVF7 368 aa9.4□□□□□ -0.91
COL25A1-208ENST00000610288 EVPLLA8MZ36 301 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 STK25O00506 426 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 PROCP04070 461 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 PTGER2P43116 358 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 CDC42EP1Q00587 391 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 DMC1Q14565 340 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 LPIN1Q14693 890 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 FAM83EQ2M2I3 478 aa9.39□□□□□ -0.91
COL25A1-208ENST00000610288 ATF7IP2Q5U623 682 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms