RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DPY19L3Q6ZPD9 716 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 ZNF551Q7Z340 670 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 PEG10Q86TG7 708 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 TTC30AQ86WT1 665 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 METTL25Q8N6Q8 603 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 SUN3Q8TAQ9 357 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 TRAPPC12Q8WVT3 735 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 TRIM63Q969Q1 353 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 EID2BQ96D98 161 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 KATNAL1Q9BW62 490 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 NKX1-2Q9UD57 310 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 SCAF8Q9UPN6 1271 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 COL15A1P39059 1388 aa4.99□□□□□ -1.61
SMCHD1-213ENST00000609587 J3KTA2 159 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 FCHO1O14526 889 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 PCDH17O14917 1159 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 PMPCBO75439 489 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 TTLL1O95922 423 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 ITGA2BP08514 1039 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 DLDP09622 509 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 NDUFB7P17568 137 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 GKP32189 559 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 GRIA3P42263 894 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 POLE2P56282 527 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 EIF4A1P60842 406 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 FOXO1Q12778 655 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 CYP1B1Q16678 543 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 TRIM71Q2Q1W2 868 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 PARS2Q7L3T8 475 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 MYRIPQ8NFW9 859 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 RP9Q8TA86 221 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 SCLT1Q96NL6 688 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 WDR24Q96S15 920 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 SORBS1Q9BX66 1292 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 HERC5Q9UII4 1024 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 FER1L4A9Z1Z3 1794 aa4.98□□□□□ -1.61
SMCHD1-213ENST00000609587 PNMA6EA0A0J9YXQ4 647 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 M0R3H8 397 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 AP4M1O00189 453 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 CES2O00748 559 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 DNPH1O43598 174 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 WDR47O94967 919 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 ANXA6P08133 673 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 EBLN1P0CF75 366 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 TMEM225BP0DP42 221 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 ENGP17813 658 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 PCSK6P29122 969 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 CYP2C18P33260 490 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 PPM1FP49593 454 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 CACNA2D1P54289 1103 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 SUMO2P61956 95 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 E2F1Q01094 437 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 PRKG1Q13976 671 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 ACOX1Q15067 660 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 ST3GAL2Q16842 350 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 SULT6B1Q6IMI4 303 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 KLHL17Q6TDP4 642 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 Q6ZWC4 215 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 WDR53Q7Z5U6 358 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 VPS50Q96JG6 964 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 PRR25Q96S07 402 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 NUDT22Q9BRQ3 303 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 DUSP26Q9BV47 211 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 TMEM120AQ9BXJ8 343 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 TP63Q9H3D4 680 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 SERTAD4Q9NUC0 356 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 DLL3Q9NYJ7 618 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 TLK1Q9UKI8 766 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 GABRQQ9UN88 632 aa4.97□□□□□ -1.61
SMCHD1-213ENST00000609587 LINC00473A8K010 186 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 A8MVJ9 347 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 QSOX1O00391 747 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 CREB3O43889 395 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 GYS1P13807 737 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 JUPP14923 745 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 VEGFAP15692 232 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 CREB1P16220 341 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 CTGFP29279 349 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 PBX1P40424 430 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 MTAPQ13126 283 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 CSHL1Q14406 222 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 GRM4Q14833 912 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 TIGD6Q17RP2 521 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 P3H1Q32P28 736 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 TBC1D25Q3MII6 688 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 ATPAF1Q5TC12 328 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 RINT1Q6NUQ1 792 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 ANKRD16Q6P6B7 361 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 LDHAL6AQ6ZMR3 332 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 NRSN1Q8IZ57 195 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 SIRT6Q8N6T7 355 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 BOLLQ8N9W6 283 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 ABHD11Q8NFV4 315 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 WDYHV1Q96HA8 205 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 ISCA1Q9BUE6 129 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 KRTAP1-5Q9BYS1 174 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 DUSP22Q9NRW4 184 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 LUZP4Q9P127 313 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 SLC17A6Q9P2U8 582 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 RNF7Q9UBF6 113 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms