RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 PMM2O15305 246 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 P4HA2O15460 535 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 GREM1O60565 184 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
TOM1-218ENST00000608674 ZBED1O96006 694 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 VDRP11473 427 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 BMP6P22004 513 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 GBP1P32455 592 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 TKTL1P51854 596 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 STX17P56962 302 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 YWHAGP61981 247 aaKnown RBP eCLIP13.89□□□□□ -0.19
TOM1-218ENST00000608674 BST2Q10589 180 aaKnown RBP13.89□□□□□ -0.19
TOM1-218ENST00000608674 EFEMP1Q12805 493 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 PAK1Q13153 545 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 C10orf76Q5T2E6 689 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 GRAMD4Q6IC98 578 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 FOXR2Q6PJQ5 311 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 TMEM270Q6UE05 265 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 PRR23CQ6ZRP0 262 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 TRMT11Q7Z4G4 463 aaKnown RBP13.89□□□□□ -0.19
TOM1-218ENST00000608674 ETFBKMTQ8IXQ9 262 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 PPM1KQ8N3J5 372 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 IL17RCQ8NAC3 791 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 ZC3H10Q96K80 434 aaKnown RBP13.89□□□□□ -0.19
TOM1-218ENST00000608674 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
TOM1-218ENST00000608674 TPSD1Q9BZJ3 242 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 DCLK3Q9C098 648 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 ARRDC1-AS1Q9H2J1 176 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 POLMQ9NP87 494 aaPredicted RBP13.89□□□□□ -0.19
TOM1-218ENST00000608674 BCCIPQ9P287 314 aaKnown RBP eCLIP13.89□□□□□ -0.19
TOM1-218ENST00000608674 TSPAN16Q9UKR8 245 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 PCDHB4Q9Y5E5 795 aa13.89□□□□□ -0.19
TOM1-218ENST00000608674 CNOT1A5YKK6 2376 aaKnown RBP13.89□□□□□ -0.19
TOM1-218ENST00000608674 ANTXRLA6NF34 631 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 SGK1O00141 431 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 DCLK1O15075 740 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 STC2O76061 302 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 EPN2O95208 641 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 HMBSP08397 361 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 PAEPP09466 180 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 TYRP14679 529 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 KIR2DL1P43626 348 aaPredicted RBP13.88□□□□□ -0.19
TOM1-218ENST00000608674 UBE2HP62256 183 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 PDE4CQ08493 712 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 PLK5Q496M5 336 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 RAB41Q5JT25 222 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 C11orf74Q86VG3 221 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 SIX6OS1Q8N1H7 587 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 ZNF513Q8N8E2 541 aaPredicted RBP13.88□□□□□ -0.19
TOM1-218ENST00000608674 TERB1Q8NA31 727 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 C12orf50Q8NA57 414 aaPredicted RBP13.88□□□□□ -0.19
TOM1-218ENST00000608674 NETO1Q8TDF5 533 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 KCNV2Q8TDN2 545 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 BHMTQ93088 406 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 CNOT6LQ96LI5 555 aaKnown RBP13.88□□□□□ -0.19
TOM1-218ENST00000608674 RTKNQ9BST9 563 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 SRRTQ9BXP5 876 aaKnown RBP13.88□□□□□ -0.19
TOM1-218ENST00000608674 ULBP1Q9BZM6 244 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 MARCH2Q9P0N8 246 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 INVSQ9Y283 1065 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 PCDHGA5Q9Y5G8 931 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.88□□□□□ -0.19
TOM1-218ENST00000608674 SPAG17Q6Q759 2223 aa13.88□□□□□ -0.19
TOM1-218ENST00000608674 MYOFQ9NZM1 2061 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.87□□□□□ -0.19
TOM1-218ENST00000608674 SLC12A8A0AV02 714 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 ZBTB24O43167 697 aaPredicted RBP13.87□□□□□ -0.19
TOM1-218ENST00000608674 CACNG3O60359 315 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 SETSIPP0DME0 302 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
TOM1-218ENST00000608674 CHKAP35790 457 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 ATXN1P54253 815 aaKnown RBP13.87□□□□□ -0.19
TOM1-218ENST00000608674 CAMK4Q16566 473 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
TOM1-218ENST00000608674 PM20D1Q6GTS8 502 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 SDE2Q6IQ49 451 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 TMEM92Q6UXU6 159 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 Q6ZNB5 142 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 RASSF3Q86WH2 238 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 PGBD3Q8N328 593 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 TRIML1Q8N9V2 468 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 UBA3Q8TBC4 463 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 RNF139Q8WU17 664 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 DUSP15Q9H1R2 295 aaPredicted RBP13.87□□□□□ -0.19
TOM1-218ENST00000608674 OLA1Q9NTK5 396 aaKnown RBP13.87□□□□□ -0.19
TOM1-218ENST00000608674 CHMP5Q9NZZ3 219 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 MARK1Q9P0L2 795 aa13.87□□□□□ -0.19
TOM1-218ENST00000608674 DNAH14Q0VDD8 3507 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 TULP2O00295 520 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 O00370 1275 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 TRIM24O15164 1050 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 AFPP02771 609 aaKnown RBP13.86□□□□□ -0.19
TOM1-218ENST00000608674 ZNF806P0C7X5 589 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 DGKGP49619 791 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 ADIGQ0VDE8 80 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 KCNH2Q12809 1159 aa13.86□□□□□ -0.19
TOM1-218ENST00000608674 BYSLQ13895 437 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms