RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 TTLL2Q9BWV7 592 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 GTPBP4Q9BZE4 634 aaKnown RBP14.38□□□□□ -0.11
CTSA-218ENST00000607814 LINC00597Q9H2U6 94 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 DMAP1Q9NPF5 467 aaPredicted RBP14.38□□□□□ -0.11
CTSA-218ENST00000607814 GMIPQ9P107 970 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 WNT6Q9Y6F9 365 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 ACACAQ13085 2346 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 BICDL2A1A5D9 508 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 ALDH1A2O94788 518 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 USP17L7P0C7H9 530 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 TCF3P15923 654 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 PPP1R2P41236 205 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 IFNAR2P48551 515 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 RAD23BP54727 409 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 USP4Q13107 963 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 SEMA3BQ13214 749 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 HNRNPDQ14103 355 aaKnown RBP14.37□□□□□ -0.11
CTSA-218ENST00000607814 ZNF77Q15935 545 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 EML3Q32P44 896 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 HSF5Q4G112 596 aaPredicted RBP14.37□□□□□ -0.11
CTSA-218ENST00000607814 HSP90AA4PQ58FG1 418 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 ANO7Q6IWH7 933 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 SLC23A3Q6PIS1 610 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 KIAA1958Q8N8K9 716 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 SLC4A11Q8NBS3 891 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 MDGA1Q8NFP4 955 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 GPT2Q8TD30 523 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 SH3RF2Q8TEC5 729 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 TMEM176AQ96HP8 235 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 SPACA7Q96KW9 195 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 IPO9Q96P70 1041 aaKnown RBP14.37□□□□□ -0.11
CTSA-218ENST00000607814 TPSD1Q9BZJ3 242 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 METTL14Q9HCE5 456 aaKnown RBP14.37□□□□□ -0.11
CTSA-218ENST00000607814 ASH1LQ9NR48 2969 aaKnown RBP14.37□□□□□ -0.11
CTSA-218ENST00000607814 KLK13Q9UKR3 277 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 MMP17Q9ULZ9 603 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 INVSQ9Y283 1065 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 COQ4Q9Y3A0 265 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 ATP8B3O60423 1300 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 ANAPC1Q9H1A4 1944 aa14.37□□□□□ -0.11
CTSA-218ENST00000607814 NFATC1O95644 943 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 FAM200BP0CF97 657 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 BCKDHBP21953 392 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 P2RY2P41231 377 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 SIM1P81133 766 aaPredicted RBP14.36□□□□□ -0.11
CTSA-218ENST00000607814 MRPS21P82921 87 aaKnown RBP14.36□□□□□ -0.11
CTSA-218ENST00000607814 KCNH2Q12809 1159 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 CUL2Q13617 745 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 BYSLQ13895 437 aaKnown RBP14.36□□□□□ -0.11
CTSA-218ENST00000607814 CRY1Q16526 586 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 DPCR1Q3MIW9 517 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 KIAA1211LQ6NV74 962 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 CLEC20AQ6ZU45 233 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 RRAGAQ7L523 313 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 PROSER1Q86XN7 944 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 ARHGEF19Q8IW93 802 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 TRIML1Q8N9V2 468 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 HNRNPABQ99729 332 aaKnown RBP14.36□□□□□ -0.11
CTSA-218ENST00000607814 NUP62CLQ9H1M0 184 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 CCSER2Q9H7U1 834 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 NUDT5Q9UKK9 219 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 CPQQ9Y646 472 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 MYH10P35580 1976 aa14.36□□□□□ -0.11
CTSA-218ENST00000607814 HHLA1C9JL84 531 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 K7EQS6 105 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 LEFTY2O00292 366 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 TBX18O95935 607 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 CAPNS1P04632 268 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 MBL2P11226 248 aaPredicted RBP14.35□□□□□ -0.11
CTSA-218ENST00000607814 ENGP17813 658 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 ACO1P21399 889 aaKnown RBP14.35□□□□□ -0.11
CTSA-218ENST00000607814 PDE6CP51160 858 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 APBA1Q02410 837 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 ZNF423Q2M1K9 1284 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 C2orf27AQ580R0 203 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 PEAR1Q5VY43 1037 aaPredicted RBP14.35□□□□□ -0.11
CTSA-218ENST00000607814 CLEC17AQ6ZS10 378 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 TRIM59Q8IWR1 403 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 HDDC3Q8N4P3 179 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 LMO3Q8TAP4 145 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 CEP76Q8TAP6 659 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 WBP2Q969T9 261 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 SLITRK1Q96PX8 696 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 CRACR2AQ9BSW2 395 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 CSNK1G1Q9HCP0 422 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 RWDD2AQ9UIY3 292 aa14.35□□□□□ -0.11
CTSA-218ENST00000607814 CELSR3Q9NYQ7 3312 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 RNF225M0QZC1 329 aaPredicted RBP14.34□□□□□ -0.11
CTSA-218ENST00000607814 TULP2O00295 520 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 CYP26A1O43174 497 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 MAP3K13O43283 966 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 COCHO43405 550 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 RTN3O95197 1032 aaPredicted RBP14.34□□□□□ -0.11
CTSA-218ENST00000607814 OAS1P00973 400 aaKnown RBP14.34□□□□□ -0.11
CTSA-218ENST00000607814 CD19P15391 556 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 PFKLP17858 780 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 MAPK8P45983 427 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 GJB7Q6PEY0 223 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 RABEPKQ7Z6M1 372 aa14.34□□□□□ -0.11
CTSA-218ENST00000607814 IRF2BP1Q8IU81 584 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms