RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PIWIL1Q96J94 861 aaKnown RBP11.2□□□□□ -0.62
TUBE1-210ENST00000604967 HSD3B7Q9H2F3 369 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 CD248Q9HCU0 757 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 UBE2TQ9NPD8 197 aaPredicted RBP11.2□□□□□ -0.62
TUBE1-210ENST00000604967 SPHK2Q9NRA0 654 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 DNMT3LQ9UJW3 386 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 SMG5Q9UPR3 1016 aaKnown RBP11.2□□□□□ -0.62
TUBE1-210ENST00000604967 SH3BP1Q9Y3L3 701 aa11.2□□□□□ -0.62
TUBE1-210ENST00000604967 PRRT4C9JH25 899 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 M0QYV0 167 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 SGK1O00141 431 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 SLC9A3R1O14745 358 aaPredicted RBP11.19□□□□□ -0.62
TUBE1-210ENST00000604967 KAT7O95251 611 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 CCDC192P0DO97 292 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 SGSHP51688 502 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 PITX1P78337 314 aaPredicted RBP11.19□□□□□ -0.62
TUBE1-210ENST00000604967 BSPRYQ5W0U4 402 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 TPGS1Q6ZTW0 290 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 WDR5BQ86VZ2 330 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 DDX42Q86XP3 938 aaKnown RBP eCLIP11.19□□□□□ -0.62
TUBE1-210ENST00000604967 ALLCQ8N6M5 410 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 ATRIPQ8WXE1 791 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 SHC3Q92529 594 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 BHMTQ93088 406 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 MYEOVQ96EZ4 313 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 ACOX2Q99424 681 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 PLK2Q9NYY3 685 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 MARCH2Q9P0N8 246 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 TBC1D14Q9P2M4 693 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 SFMBT1Q9UHJ3 866 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 RASAL2Q9UJF2 1139 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 AGO1Q9UL18 857 aaKnown RBP11.19□□□□□ -0.62
TUBE1-210ENST00000604967 LAMA1P25391 3075 aa11.19□□□□□ -0.62
TUBE1-210ENST00000604967 CEP250Q9BV73 2442 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 SLC12A8A0AV02 714 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 FAM170AA1A519 330 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 FOXN3O00409 490 aaPredicted RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 DCLK1O15075 740 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ADH1CP00326 375 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 SETSIPP0DME0 302 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ERCC5P28715 1186 aaPredicted RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 EIF2DP41214 584 aaKnown RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 KLK7P49862 253 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 YWHAEP62258 255 aaKnown RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 NR1H3Q13133 447 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 DMC1Q14565 340 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 TAF5Q15542 800 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 TRIP4Q15650 581 aaPredicted RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ANO4Q32M45 955 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 CDKAL1Q5VV42 579 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 FYB2Q5VWT5 728 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ZC3H14Q6PJT7 736 aaKnown RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 SYT13Q7L8C5 426 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 LONP2Q86WA8 852 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 CREBRFQ8IUR6 639 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 FAM217AQ8IXS0 508 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 FRMD1Q8N878 549 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ZNF606Q8WXB4 792 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 OTUB2Q96DC9 234 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ERLEC1Q96DZ1 483 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 IPO9Q96P70 1041 aaKnown RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 PNKPQ96T60 521 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 TUBGCP2Q9BSJ2 902 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 FAM126AQ9BYI3 521 aaPredicted RBP11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ADAM33Q9BZ11 813 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 NACA2Q9H009 215 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 SEMA4AQ9H3S1 761 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 THAP9Q9H5L6 903 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 ARHGEF4Q9NR80 690 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 MARK1Q9P0L2 795 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 FBXO10Q9UK96 956 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 KIAA1257Q9ULG3 409 aa11.18□□□□□ -0.62
TUBE1-210ENST00000604967 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 NEDD8-MDP1E9PL57 170 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 EPHB6O15197 1021 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 PAPSS1O43252 624 aaPredicted RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 CACNG3O60359 315 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 LETM1O95202 739 aaPredicted RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 PENKP01210 267 aaPredicted RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 IGLV3-27P01718 113 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 KRT5P13647 590 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 TYRP14679 529 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 CORO1AP31146 461 aaKnown RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 CLCN1P35523 988 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 TIE1P35590 1138 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 MTIF2P46199 727 aaKnown RBP11.17□□□□□ -0.62
TUBE1-210ENST00000604967 PSEN1P49768 467 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 GAD2Q05329 585 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 NCAPHQ15003 741 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 ARHGAP44Q17R89 818 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 EXOC3L4Q17RC7 722 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 VWA3BQ502W6 1294 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 SYPL2Q5VXT5 272 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 EGFLAMQ63HQ2 1017 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 TMEM215Q68D42 235 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 GBP6Q6ZN66 633 aa11.17□□□□□ -0.62
TUBE1-210ENST00000604967 APTXQ7Z2E3 356 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms