RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 EFHBQ8N7U6 833 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 SYN2Q92777 582 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 MED15Q96RN5 788 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 KCTD15Q96SI1 283 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CHRDQ9H2X0 955 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CD93Q9NPY3 652 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 WARS2Q9UGM6 360 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 DAGLAQ9Y4D2 1042 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CHURC1-FNTBB4DL54 471 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 FZD9O00144 591 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 B4GALT4O60513 344 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 ADAMTS4O75173 837 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 USP1O94782 785 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 KRT19P08727 400 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TNFSF4P23510 183 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CASP14P31944 242 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 NLRP11P59045 1033 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 ART3Q13508 389 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 STARD3Q14849 445 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 AOC3Q16853 763 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 Q5PR19 223 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 DUS1LQ6P1R4 473 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TLDC1Q6P9B6 456 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TRIM72Q6ZMU5 477 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TRIM67Q6ZTA4 783 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 LNX2Q8N448 690 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 OR8K3Q8NH51 312 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 PRPF31Q8WWY3 499 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 ACSF2Q96CM8 615 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TUBGCP3Q96CW5 907 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 AK8Q96MA6 479 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 HHIPQ96QV1 700 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 EMILIN2Q9BXX0 1053 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 MRPL1Q9BYD6 325 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 PITHD1Q9GZP4 211 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 RNF38Q9H0F5 515 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 SMARCAD1Q9H4L7 1026 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 NMRK2Q9NPI5 230 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TOPORSQ9NS56 1045 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 INTS9Q9NV88 658 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 GID8Q9NWU2 228 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 PCOLCE2Q9UKZ9 415 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 SIPA1L3O60292 1781 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TRBV23OR9-2A0A075B6M9 112 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 RGSL1A5PLK6 1076 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 SCAF4O95104 1147 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CLPTM1O96005 669 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CYP1A1P04798 512 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 RETP07949 1114 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CALCOCO2Q13137 446 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 HABP2Q14520 560 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CFAP221Q4G0U5 840 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 RTP2Q5QGT7 225 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 ZNF658Q5TYW1 1059 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 GPR139Q6DWJ6 353 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 OR7G1Q8NGA0 311 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 MOSPD2Q8NHP6 518 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 GRIN3AQ8TCU5 1115 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 FBXO41Q8TF61 875 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CPT1BQ92523 772 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 ASB2Q96Q27 587 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 UHRF1Q96T88 793 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 CHMP1AQ9HD42 196 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 THG1LQ9NWX6 298 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 HMG20BQ9P0W2 317 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 LARSQ9P2J5 1176 aaKnown RBP7.41□□□□□ -1.22
TUBE1-207ENST00000604689 GGA2Q9UJY4 613 aa7.41□□□□□ -1.22
TUBE1-207ENST00000604689 DCDC2CA8MYV0 355 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 STARD3NLO95772 234 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 LMNAP02545 664 aaKnown RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 ATP1A1P05023 1023 aaKnown RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 VAV1P15498 845 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 KELP23276 732 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 RXRBP28702 533 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 PSEN2P49810 448 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 ATXN1P54253 815 aaKnown RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 SSTP61278 116 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 PTPN11Q06124 597 aaPredicted RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 SCRN3Q0VDG4 424 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 RIPK1Q13546 671 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 SF1Q15637 639 aaKnown RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 CYB5R2Q6BCY4 276 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 ARMC6Q6NXE6 501 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 MEX3BQ6ZN04 569 aaKnown RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 FAM228AQ86W67 206 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 OR2C3Q8N628 320 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 ARRDC4Q8NCT1 418 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 STKLD1Q8NE28 680 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 CHP1Q99653 195 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 FRMD8P1Q9BZ68 369 aaPredicted RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 PAIP1Q9H074 479 aaKnown RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 BTBD7Q9P203 1132 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 VPS28Q9UK41 221 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 FAM32AQ9Y421 112 aaKnown RBP7.4□□□□□ -1.22
TUBE1-207ENST00000604689 MYO3BQ8WXR4 1341 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 A0A1W2PQU0 124 aa7.4□□□□□ -1.22
TUBE1-207ENST00000604689 STX16-NPEPL1H3BU86 382 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms