RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 SLC5A3P53794 718 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PTPRNQ16849 979 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DUOXA2Q1HG44 320 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 LARP1BQ659C4 914 aaKnown RBP12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 B3GALNT2Q8NCR0 500 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 KCNK16Q96T55 309 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SEL1LQ9UBV2 794 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SNX11Q9Y5W9 270 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PLXND1Q9Y4D7 1925 aa12.46□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PI4KAP42356 2102 aa12.46□□□□□ -0.42
PDLIM1P1-201ENST00000604187 DENND4CQ5VZ89 1909 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 A8MXQ7 604 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 E9PAM4 449 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TLR5O60602 858 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TACC1O75410 805 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PRPF6O94906 941 aaKnown RBP12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TBX18O95935 607 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CISD3P0C7P0 127 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ZDHHC11BP0C7U3 371 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GAP43P17677 238 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 OXTRP30559 389 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 LONP1P36776 959 aaKnown RBP12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 EIF2S3P41091 472 aaKnown RBP12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CLDN6P56747 220 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TNNC1P63316 161 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SEMG2Q02383 582 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SNX30Q5VWJ9 437 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 LRRC69Q6ZNQ3 347 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FAM35AQ86V20 835 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FAM124AQ86V42 546 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TMPRSS6Q8IU80 811 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CBWD2Q8IUF1 395 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GPD1LQ8N335 351 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 LSM14AQ8ND56 463 aaKnown RBP12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ENGASEQ8NFI3 743 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 C1orf216Q8TAB5 229 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PRCCQ92733 491 aaPredicted RBP12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SIPA1Q96FS4 1042 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FGFBP2Q9BYJ0 223 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FTSJ1Q9UET6 329 aa12.45□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ATP8B3O60423 1300 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 J3QKU1 62 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 KCNK3O14649 394 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TLX3O43711 291 aaPredicted RBP12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SYNCRIPO60506 623 aaKnown RBP12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 IGLV3-19P01714 112 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 IL12RB1P42701 662 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PGFP49763 221 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CCT8P50990 548 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 LAYNQ6UX15 382 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TMPRSS12Q86WS5 348 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 WDR49Q8IV35 697 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 MED10Q9BTT4 135 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 NUP58Q9BVL2 599 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 KLF16Q9BXK1 252 aaPredicted RBP12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PLK2Q9NYY3 685 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 LSM7Q9UK45 103 aaKnown RBP12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PCDHB13Q9Y5F0 798 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ADAMTS9Q9P2N4 1935 aa12.44□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ZNF638Q14966 1978 aaKnown RBP12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PTPRQQ9UMZ3 2332 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FAM92AA1XBS5 289 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 H0Y8X5 98 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CAPN9O14815 690 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 RRP8O43159 456 aaKnown RBP12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ACADMP11310 421 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 IL9RQ01113 521 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TEAD4Q15561 434 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GEN1Q17RS7 908 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 INAVAQ3KP66 663 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 WDR72Q3MJ13 1102 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 C6orf118Q5T5N4 469 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 IGSF8Q969P0 613 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 DNAJC19Q96DA6 116 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 P2RY11Q96G91 374 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 C6orf106Q9H6K1 298 aaPredicted RBP12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 OLFML3Q9NRN5 406 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 KRT82Q9NSB4 513 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 IL37Q9NZH6 218 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 THAP10Q9P2Z0 257 aaPredicted RBP12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ANKRD6Q9Y2G4 727 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 KIF3AQ9Y496 699 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PLXNB3Q9ULL4 1909 aa12.43□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ANK1P16157 1881 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 H3BQV1 296 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 NPC1O15118 1278 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PCDHGA12O60330 932 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CST3P01034 146 aaPredicted RBP12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 IDEP14735 1019 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 JUPP14923 745 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 HNF1BP35680 557 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms