RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PPCSQ9HAB8 311 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 KLHL3Q9UH77 587 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 KDM6AO15550 1401 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-216ENST00000602557 IRF1P10914 325 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 FOXO4P98177 505 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 SLC5A9Q2M3M2 681 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 SSNA1O43805 119 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 IL18RAPO95256 599 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 GPR107Q5VW38 600 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 RASSF6Q6ZTQ3 369 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 DENND5BQ6ZUT9 1274 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 PRRG1O14668 218 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 S100A6P06703 90 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 THRAP10827 490 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 PNMA8BQ9ULN7 279 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-216ENST00000602557 TMCO1Q9UM00 188 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 DGKBQ9Y6T7 804 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 AREL1O15033 823 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 HLA-DRAP01903 254 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 DGKDQ16760 1214 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 RIPOR1Q6ZS17 1223 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 RORBQ92753 470 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 SRPK1Q96SB4 655 aaKnown RBP8.95□□□□□ -0.98
CSMD1-216ENST00000602557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.95□□□□□ -0.98
CSMD1-216ENST00000602557 PAK5Q9P286 719 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 ADAM30Q9UKF2 790 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 SSU72P8A0A1W2PR75 194 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 IL12AP29459 219 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CAPZA2P47755 286 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 POU4F1Q01851 419 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 EIF2B5Q13144 721 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PDPK2PQ6A1A2 396 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PTRHD1Q6GMV3 140 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 SCFD2Q8WU76 684 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 JADE3Q92613 823 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 FAM84BQ96KN1 310 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 MTMR4Q9NYA4 1195 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CAPN6Q9Y6Q1 641 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 RPS6KA4O75676 772 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ZNF37AP17032 561 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ERCC2P18074 760 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 AGKQ53H12 422 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TDRD5Q8NAT2 981 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 RSAD1Q9HA92 442 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PCDHB8Q9UN66 801 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 HS6ST1O60243 411 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PDE9AO76083 593 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PGK2P07205 417 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PIK3R1P27986 724 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ALDH1A3P47895 512 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CHRNB3Q05901 458 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TRIM65Q6PJ69 517 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PODNQ7Z5L7 613 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 BHMTQ93088 406 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ZNF669Q96BR6 464 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 KCND2Q9NZV8 630 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CCDC59Q9P031 241 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 WDR35Q9P2L0 1181 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PSIP1O75475 530 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CLEC16AQ2KHT3 1053 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PRUNE1Q86TP1 453 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ATXN2LQ8WWM7 1075 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 IGSF9BQ9UPX0 1349 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TRPC5OSA6NMA1 111 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 SP100P23497 879 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 RPL10AP62906 217 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 FOLH1Q04609 750 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 MAPK7Q13164 816 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 SCARA3Q6AZY7 606 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TAF2Q6P1X5 1199 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TPCN2Q8NHX9 752 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 RBBP8Q99708 897 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 NT5C1AQ9BXI3 368 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 HEATR9A2RTY3 570 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 DBTP11182 482 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 RALBP11234 206 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TALDO1P37837 337 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 SERPINH1P50454 418 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 EDRF1Q3B7T1 1238 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PYDC2Q56P42 97 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 DNAJC1Q96KC8 554 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 THUMPD3Q9BV44 507 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 RAB21Q9UL25 225 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CCDC162PA2VCL2 907 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CENPXA8MT69 81 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TFECO14948 347 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CST8O60676 142 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 GUCA1CO95843 209 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 SMU1Q2TAY7 513 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PPP1R15BQ5SWA1 713 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 PPIL6Q8IXY8 311 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CCDC33Q8N5R6 958 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 TFB1MQ8WVM0 346 aaKnown RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 CENPTQ96BT3 561 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 RTN3O95197 1032 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-216ENST00000602557 BCAP31P51572 246 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 ZFP69Q49AA0 526 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 FAR1Q8WVX9 515 aa8.94□□□□□ -0.98
CSMD1-216ENST00000602557 BORCS5Q969J3 196 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms