RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 STK33Q9BYT3 514 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 GANQ9H2C0 597 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 ST7Q9NRC1 585 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
SSBP4-213ENST00000602088 SPATA6Q9NWH7 488 aaPredicted RBP17.53■□□□□ 0.4
SSBP4-213ENST00000602088 MARCH2Q9P0N8 246 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 CYTH4Q9UIA0 394 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 RASAL2Q9UJF2 1139 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 LSM7Q9UK45 103 aaKnown RBP17.53■□□□□ 0.4
SSBP4-213ENST00000602088 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 LGALS16A8MUM7 142 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 STC2O76061 302 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 PLA2G5P39877 138 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 GRSF1Q12849 480 aaKnown RBP eCLIP17.52■□□□□ 0.4
SSBP4-213ENST00000602088 GAS6Q14393 721 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-213ENST00000602088 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 FSTL4Q6MZW2 842 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 Q6ZNB5 142 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 TMEM110Q86TL2 294 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 SCUBE3Q8IX30 993 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 MAML2Q8IZL2 1156 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-213ENST00000602088 SYNPOQ8N3V7 929 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 WDTC1Q8N5D0 677 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 CLEC4CQ8WTT0 213 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 EDEM1Q92611 657 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 ATOH1Q92858 354 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-213ENST00000602088 CD101Q93033 1021 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 EXOC4Q96A65 974 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 FAM122AQ96E09 287 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 MIS12Q9H081 205 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 LHX5Q9H2C1 402 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 STRIP2Q9ULQ0 834 aa17.52■□□□□ 0.4
SSBP4-213ENST00000602088 MYOFQ9NZM1 2061 aa17.52■□□□□ 0.39
SSBP4-213ENST00000602088 WDR87Q6ZQQ6 2873 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 F8VZ95 297 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 LAMTOR5O43504 91 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 ADH1CP00326 375 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 KLKB1P03952 638 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 DRD1P21728 446 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 KRT9P35527 623 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 OPRD1P41143 372 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 UBXN1Q04323 297 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 IQCB1Q15051 598 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 SYCP1Q15431 976 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 TMEM25Q86YD3 366 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 RNF139Q8WU17 664 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 ERGIC2Q96RQ1 377 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 SPHK2Q9NRA0 654 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 FAM207AQ9NSI2 230 aaPredicted RBP17.51■□□□□ 0.39
SSBP4-213ENST00000602088 DAAM1Q9Y4D1 1078 aa17.51■□□□□ 0.39
SSBP4-213ENST00000602088 SLC12A8A0AV02 714 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 EPHB6O15197 1021 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 SART1O43290 800 aaKnown RBP17.5■□□□□ 0.39
SSBP4-213ENST00000602088 EGFP01133 1207 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 LTFP02788 710 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 ADH5P11766 374 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 POLR2FP61218 127 aaKnown RBP17.5■□□□□ 0.39
SSBP4-213ENST00000602088 GAD2Q05329 585 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 PDCLQ13371 301 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 Q6ZS52 159 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 SPEM1Q8N4L4 309 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 DCLK3Q9C098 648 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 FAM86C1Q9NVL1 165 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 FBXO4Q9UKT5 387 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 ZNF510Q9Y2H8 683 aa17.5■□□□□ 0.39
SSBP4-213ENST00000602088 E5RJQ4 531 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 PAPSS1O43252 624 aaPredicted RBP17.49■□□□□ 0.39
SSBP4-213ENST00000602088 FYNP06241 537 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 HMBSP08397 361 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 SP9P0CG40 484 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 CYP11B1P15538 503 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 EIF2DP41214 584 aaKnown RBP17.49■□□□□ 0.39
SSBP4-213ENST00000602088 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 PASD1Q8IV76 773 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 FMNL3Q8IVF7 1028 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 EZH1Q92800 747 aaPredicted RBP17.49■□□□□ 0.39
SSBP4-213ENST00000602088 GOLGA1Q92805 767 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 PPP1R13BQ96KQ4 1090 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 SFMBT1Q9UHJ3 866 aa17.49■□□□□ 0.39
SSBP4-213ENST00000602088 HBS1LQ9Y450 684 aaKnown RBP17.49■□□□□ 0.39
SSBP4-213ENST00000602088 HOXC11O43248 304 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 SLC6A11P48066 632 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 JAM2P57087 298 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 CSTF1Q05048 431 aaKnown RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 TRIP4Q15650 581 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 ZNF528Q3MIS6 628 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 ZSCAN23Q3MJ62 389 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 FBXO43Q4G163 708 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 BEND5Q7L4P6 421 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 C12orf40Q86WS4 652 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 C1orf131Q8NDD1 294 aaKnown RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 NEK11Q8NG66 645 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 DDX1Q92499 740 aaKnown RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 PLD4Q96BZ4 506 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 PCMTD1Q96MG8 357 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 NOX5Q96PH1 765 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 CPXM1Q96SM3 734 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms