RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ADIGQ0VDE8 80 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 HTR4Q13639 388 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 TCEAL1Q15170 157 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 PABPC1LQ4VXU2 614 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 HS1BP3Q53T59 392 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 EFHC1Q5JVL4 640 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 SDHAF4Q5VUM1 108 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 PLEKHA7Q6IQ23 1121 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 OLFML1Q6UWY5 402 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 TOGARAM2Q6ZUX3 1019 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 H2AFVQ71UI9 128 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 BHLHA9Q7RTU4 235 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 XYLT1Q86Y38 959 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 MAML2Q8IZL2 1156 aaPredicted RBP12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 TXLNBQ8N3L3 684 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 C3orf20Q8ND61 904 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 SCAMP5Q8TAC9 235 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 SLITRK1Q96PX8 696 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 RPP25Q9BUL9 199 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 ULBP1Q9BZM6 244 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 SYNCQ9H7C4 482 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 ST7Q9NRC1 585 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 SPTLC3Q9NUV7 552 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 TMEM51Q9NW97 253 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 CLIC5Q9NZA1 410 aa12.21□□□□□ -0.45
CHMP2A-207ENST00000600804 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 BTNL10A8MVZ5 291 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 ANHXE9PGG2 379 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 CCL16O15467 120 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 LMNAP02545 664 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 F11P03951 625 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 CYP1A2P05177 515 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 USP17L7P0C7H9 530 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 TMEM253P0C7T8 217 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 SRFP11831 508 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 CDC25CP30307 473 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 TUBP50607 506 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 CDR1P51861 262 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 GALCP54803 685 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 GPC5P78333 572 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 SLC6A3Q01959 620 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 TAF10Q12962 218 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 TAF12Q16514 161 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 KLHDC10Q6PID8 442 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 MMS22LQ6ZRQ5 1243 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 ZNF662Q6ZS27 426 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 SCUBE3Q8IX30 993 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 KIAA2013Q8IYS2 634 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 GIPC2Q8TF65 315 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 SMG7Q92540 1137 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 FBXO32Q969P5 355 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 CALR3Q96L12 384 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 C11orf70Q9BRQ4 267 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 FOXQ1Q9C009 403 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 TLR8Q9NR97 1041 aaKnown RBP12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 KIF26AQ9ULI4 1882 aaPredicted RBP12.2□□□□□ -0.46
CHMP2A-207ENST00000600804 A0A0A6YYK5 440 aaPredicted RBP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 ZNF840PA6NDX5 716 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 SIGLEC16A6NMB1 481 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 ZNF197O14709 1029 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 PJA2O43164 708 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 HSF2BPO75031 334 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 TADA3O75528 432 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 SP9P0CG40 484 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 LAMP2P13473 410 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 LCP1P13796 627 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 DDX6P26196 483 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 WEE1P30291 646 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 MAGEA1P43355 309 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 VAV2P52735 878 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 MTF1Q14872 753 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 PPP1R15BQ5SWA1 713 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 CYP4A22Q5TCH4 519 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 FAM183BPQ6ZVS7 135 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 GET4Q7L5D6 327 aaPredicted RBP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 SCD5Q86SK9 330 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 FNIP1Q8TF40 1166 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 CTNNBL1Q8WYA6 563 aaPredicted RBP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 FGF14Q92915 247 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 POPDC2Q9HBU9 364 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 MRPL47Q9HD33 250 aaKnown RBP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 ARHGEF3Q9NR81 526 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 ABCC13Q9NSE7 274 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 PARVAQ9NVD7 372 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 RRN3Q9NYV6 651 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 TRPM5Q9NZQ8 1165 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 UVRAGQ9P2Y5 699 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 TMEM59LQ9UK28 342 aa12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 REXO2Q9Y3B8 237 aaKnown RBP12.19□□□□□ -0.46
CHMP2A-207ENST00000600804 PCDHA13Q9Y5I0 950 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms