RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PCDHA13Q9Y5I0 950 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 SIGLEC16A6NMB1 481 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 SOBPA7XYQ1 873 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 CYP1A2P05177 515 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 MBL2P11226 248 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 KRT3P12035 628 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 LAMP2P13473 410 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 PFKLP17858 780 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RFC1P35251 1148 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 ATP5C1P36542 298 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RPL7AP62424 266 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 GPC5P78333 572 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 ZXDBP98169 803 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 EFEMP1Q12805 493 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RSRC2Q7L4I2 434 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 OTOP3Q7RTS5 596 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 ARID3BQ8IVW6 561 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RIN3Q8TB24 985 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 DQX1Q8TE96 717 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RNF139Q8WU17 664 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RSPRY1Q96DX4 576 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RPGRIP1Q96KN7 1286 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 ZFRQ96KR1 1074 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 ZNF830Q96NB3 372 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 ASB16Q96NS5 453 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 DESI2Q9BSY9 194 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 ADAM33Q9BZ11 813 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 SMPD4Q9NXE4 827 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 GDE1Q9NZC3 331 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 RASAL2Q9UJF2 1139 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 USTQ9Y2C2 406 aa20.92■□□□□ 0.94
SHKBP1-222ENST00000600320 PRUNE2Q8WUY3 3088 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 CAPN9O14815 690 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 CKMP06732 381 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 TMEM253P0C7T8 217 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 TFE3P19532 575 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 FCARP24071 287 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 SLC7A9P82251 487 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 OGDHQ02218 1023 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 SPA17Q15506 151 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 DCAF6Q58WW2 860 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 OTUD1Q5VV17 481 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 KLHDC10Q6PID8 442 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 TAC4Q86UU9 113 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 TDRD5Q8NAT2 981 aaKnown RBP20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 ADAM32Q8TC27 787 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 RXFP2Q8WXD0 754 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 USP13Q92995 863 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 MCEEQ96PE7 176 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 KLF16Q9BXK1 252 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 TRIM7Q9C029 511 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 NACA2Q9H009 215 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 PARVAQ9NVD7 372 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 EPS15L1Q9UBC2 864 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 FAM50BQ9Y247 325 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 CCL26Q9Y258 94 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 CPQQ9Y646 472 aa20.91■□□□□ 0.94
SHKBP1-222ENST00000600320 RCCD1A6NED2 376 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 C2CD4BA6NLJ0 364 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 ARHGAP6O43182 974 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 MSI1O43347 362 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 NOS2P35228 1153 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 MATKP42679 507 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 AAK1Q2M2I8 961 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 C10orf76Q5T2E6 689 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 ARCQ7LC44 396 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 MIB1Q86YT6 1006 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 ADAMTS19Q8TE59 1207 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 ATXN2LQ8WWM7 1075 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 CTNNBL1Q8WYA6 563 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 SMARCD2Q92925 531 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 WBP2Q969T9 261 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 CDK5RAP1Q96SZ6 601 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 NPY6RQ99463 290 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 DDX23Q9BUQ8 820 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 TRIM62Q9BVG3 475 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 SMOC2Q9H3U7 446 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 GKN1Q9NS71 199 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 OLA1Q9NTK5 396 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 MARCH2Q9P0N8 246 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 CALCOCO1Q9P1Z2 691 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 ZMYM5Q9UJ78 669 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 DNMT3LQ9UJW3 386 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 ARHGAP26Q9UNA1 814 aa20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 NUP210Q8TEM1 1887 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-222ENST00000600320 A0A0U1RQJ8 604 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 SLC12A8A0AV02 714 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 IGLV3-25P01717 112 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 WEE1P30291 646 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 AVPR1AP37288 418 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 VIPR2P41587 438 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 TADA2BQ86TJ2 420 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 ATRIPQ8WXE1 791 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 ACSF2Q96CM8 615 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 CFAP57Q96MR6 1250 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 LRRC3BQ96PB8 259 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 NUP85Q9BW27 656 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 INTUQ9ULD6 942 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms