RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 KCNK1O00180 336 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 IGF2BP3O00425 579 aaKnown RBP eCLIP11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 USP12O75317 370 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 SLC8A3P57103 927 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 OLIG2Q13516 323 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 SNX17Q15036 470 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 SETDB1Q15047 1291 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 GNASQ5JWF2 1037 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 PIGZQ86VD9 579 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 FNIP1Q8TF40 1166 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 NSMCE1Q8WV22 266 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 EDEM1Q92611 657 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 RNF34Q969K3 372 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 WDR83Q9BRX9 315 aaKnown RBP11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 KLC2Q9H0B6 622 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 SLC5A4Q9NY91 659 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 UBQLN1Q9UMX0 589 aaKnown RBP11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 A8MUI8 341 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 TRIM49D1C9J1S8 452 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 TKTP29401 623 aaKnown RBP11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 ARL4AP40617 200 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 MLH1P40692 756 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 NOMO1Q15155 1222 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 FAM187BQ17R55 369 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 BOLA3Q53S33 107 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 HEATR6Q6AI08 1181 aaKnown RBP11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 APBB1IPQ7Z5R6 666 aaPredicted RBP11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 MAGEB18Q96M61 343 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 GAD1Q99259 594 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 CYTH2Q99418 400 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 RHOBTB2Q9BYZ6 727 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 UBN1Q9NPG3 1134 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 DOCK3Q8IZD9 2030 aa11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 LAMA2P24043 3122 aaKnown RBP11.97□□□□□ -0.49
ARHGEF1-220ENST00000600274 ENO4A6NNW6 628 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 M0QYT0 321 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 CYB561D2O14569 222 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 GABBR2O75899 941 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 TOP3BO95985 862 aaKnown RBP11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 PSEN2P49810 448 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 TAF6P49848 677 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 TP53INP2Q8IXH6 220 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 MPP5Q8N3R9 675 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 ARRDC4Q8NCT1 418 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 SLC7A14Q8TBB6 771 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 APOL2Q9BQE5 337 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.96□□□□□ -0.494e-8■■■■■ 28.1
ARHGEF1-220ENST00000600274 BEST1O76090 585 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 METTL18O95568 372 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 BRCA1P38398 1863 aaKnown RBP11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 ABCG1P45844 678 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 SWT1Q5T5J6 900 aaKnown RBP11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 DRICH1Q6PGQ1 229 aaPredicted RBP11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 DSTYKQ6XUX3 929 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 YTHDF3Q7Z739 585 aaKnown RBP11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 ZNF410Q86VK4 478 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 VPS52Q8N1B4 723 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 PQLC3Q8N755 202 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 MECRQ9BV79 373 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 ADAMTS10Q9H324 1103 aa11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
ARHGEF1-220ENST00000600274 RRN3P2A6NIE6 340 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 SAT1P21673 171 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 PCK1P35558 622 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 INCA1Q0VD86 236 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 KLHL38Q2WGJ6 581 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 LRRC6Q86X45 466 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 SPDL1Q96EA4 605 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 NFKBIZQ9BYH8 718 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 PPP1R12CQ9BZL4 782 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 NRDE2Q9H7Z3 1164 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 PCMTD2Q9NV79 361 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 LGALS13Q9UHV8 139 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 HAO1Q9UJM8 370 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 IPPQ9Y573 584 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 SNX10Q9Y5X0 201 aa11.96□□□□□ -0.5
ARHGEF1-220ENST00000600274 NRCAMQ92823 1304 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 TRIP11Q15643 1979 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 PTPRFP10586 1907 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 CXorf49A8MYA2 514 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 STIP1P31948 543 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 BCAT1P54687 386 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 TNFAIP8L3Q5GJ75 292 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 TRMT10BQ6PF06 316 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 HFE2Q6ZVN8 426 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 ECHDC2Q86YB7 292 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 PPP1R14CQ8TAE6 165 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC35F5Q8WV83 523 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 KCNK16Q96T55 309 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 FOXP3Q9BZS1 431 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 KATNBL1Q9H079 304 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 KDM4CQ9H3R0 1056 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 SRRM3A6NNA2 597 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 GPR32O75388 356 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 POMCP01189 267 aa11.95□□□□□ -0.5
ARHGEF1-220ENST00000600274 BGNP21810 368 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms