RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 C10orf120Q5SQS8 335 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 PPP1R26Q5T8A7 1209 aaPredicted RBP19.72■□□□□ 0.75
PNKP-213ENST00000599543 KLHDC10Q6PID8 442 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 TADA2BQ86TJ2 420 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 TTC39CQ8N584 583 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 ZNF513Q8N8E2 541 aaPredicted RBP19.72■□□□□ 0.75
PNKP-213ENST00000599543 TERB1Q8NA31 727 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 KCNV2Q8TDN2 545 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 HMGB4Q8WW32 186 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 FAXDC2Q96IV6 333 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 BBS2Q9BXC9 721 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 DUSP16Q9BY84 665 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 DNAJC17Q9NVM6 304 aaKnown RBP19.72■□□□□ 0.75
PNKP-213ENST00000599543 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.72■□□□□ 0.75
PNKP-213ENST00000599543 KIAA1468Q9P260 1216 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 DNMT3LQ9UJW3 386 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 NAGPAQ9UK23 515 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 CTNND2Q9UQB3 1225 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 GON4LQ3T8J9 2241 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 CACNA1BQ00975 2339 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 CEP192Q8TEP8 1941 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 TCRBV21S2A2A0A5A6 115 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 GREM1O60565 184 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 ADAM23O75077 832 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 BCKDHBP21953 392 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 KIF11P52732 1056 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 STX17P56962 302 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 RNF43Q68DV7 783 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 ANKRD40Q6AI12 368 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 GRAMD4Q6IC98 578 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 TPGS1Q6ZTW0 290 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 CCDC186Q7Z3E2 898 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 CYP2U1Q7Z449 544 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 OLIG1Q8TAK6 271 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 SEMA4DQ92854 862 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 HEXIM2Q96MH2 286 aaKnown RBP19.71■□□□□ 0.75
PNKP-213ENST00000599543 XPO6Q96QU8 1125 aaKnown RBP19.71■□□□□ 0.75
PNKP-213ENST00000599543 TSG101Q99816 390 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 EDEM2Q9BV94 578 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 NMUR1Q9HB89 426 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 CISHQ9NSE2 258 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 RAB20Q9NX57 234 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 NUDT5Q9UKK9 219 aa19.71■□□□□ 0.75
PNKP-213ENST00000599543 TNRC6BQ9UPQ9 1833 aaKnown RBP19.71■□□□□ 0.75
PNKP-213ENST00000599543 PI4KAP42356 2102 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 PPP1R3GB7ZBB8 358 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 MDM4O15151 490 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 RALAP11233 206 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 TYRP14679 529 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 DHPSP49366 369 aaPredicted RBP19.7■□□□□ 0.74
PNKP-213ENST00000599543 MCCD1P59942 119 aaPredicted RBP19.7■□□□□ 0.74
PNKP-213ENST00000599543 DCAF17Q5H9S7 520 aaPredicted RBP19.7■□□□□ 0.74
PNKP-213ENST00000599543 TCERG1LQ5VWI1 586 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 PGBD3Q8N328 593 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 CNTNAP3BQ96NU0 1288 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 CDK5RAP1Q96SZ6 601 aaKnown RBP19.7■□□□□ 0.74
PNKP-213ENST00000599543 CNTNAP3Q9BZ76 1288 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 WDR35Q9P2L0 1181 aa19.7■□□□□ 0.74
PNKP-213ENST00000599543 SLC16A3O15427 465 aaKnown RBP19.69■□□□□ 0.74
PNKP-213ENST00000599543 MAP3K13O43283 966 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 CACNG3O60359 315 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 P2RY2P41231 377 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 PLA2G4AP47712 749 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 SLC8A3P57103 927 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 BYSLQ13895 437 aaKnown RBP19.69■□□□□ 0.74
PNKP-213ENST00000599543 LPCAT2Q7L5N7 544 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 MIB1Q86YT6 1006 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 NELFBQ8WX92 580 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 RLN3Q8WXF3 142 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 TMEM176AQ96HP8 235 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 ARID3AQ99856 593 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 FAM124BQ9H5Z6 455 aaPredicted RBP19.69■□□□□ 0.74
PNKP-213ENST00000599543 MARK1Q9P0L2 795 aa19.69■□□□□ 0.74
PNKP-213ENST00000599543 MAP1BP46821 2468 aaKnown RBP19.68■□□□□ 0.74
PNKP-213ENST00000599543 LNP1A1A4G5 178 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 TRIM24O15164 1050 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 HOXB2P14652 356 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 STIM1Q13586 685 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 COBLL1Q53SF7 1204 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 SCD5Q86SK9 330 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 SLC4A11Q8NBS3 891 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 CLIC5Q9NZA1 410 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 STARD13Q9Y3M8 1113 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 USP3Q9Y6I4 520 aa19.68■□□□□ 0.74
PNKP-213ENST00000599543 PSMA7O14818 248 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 TM4SF5O14894 197 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 KHNYNO15037 678 aaKnown RBP19.67■□□□□ 0.74
PNKP-213ENST00000599543 NTSR1P30989 418 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 RAD23BP54727 409 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 FKBP3Q00688 224 aaKnown RBP19.67■□□□□ 0.74
PNKP-213ENST00000599543 CBWD6Q4V339 395 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 CBWD3Q5JTY5 395 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 CBWD5Q5RIA9 395 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 SDE2Q6IQ49 451 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 Q6ZNB5 142 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 CHPFQ8IZ52 775 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 ZNF276Q8N554 614 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 BHMTQ93088 406 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 RASAL2Q9UJF2 1139 aa19.67■□□□□ 0.74
PNKP-213ENST00000599543 ZBTB24O43167 697 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms