RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 PALB2Q86YC2 1186 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 C18orf25Q96B23 403 aaPredicted RBP15.24■□□□□ 0.03
SYMPK-213ENST00000599460 UBXN6Q9BZV1 441 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ABCC13Q9NSE7 274 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ARHGAP28Q9P2N2 729 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 CFAP99D6REC4 459 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 C15orf59Q2T9L4 293 aaPredicted RBP15.24■□□□□ 0.03
SYMPK-213ENST00000599460 LVRNQ6Q4G3 990 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 IRF2BP1Q8IU81 584 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 CCNJLQ8IV13 435 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 RAB42Q8N4Z0 105 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 EPS8L3Q8TE67 593 aaKnown RBP15.24■□□□□ 0.03
SYMPK-213ENST00000599460 GRID1Q9ULK0 1009 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 MRPL42Q9Y6G3 142 aaKnown RBP15.24■□□□□ 0.03
SYMPK-213ENST00000599460 PHF20L1A8MW92 1017 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 SUPT3HB4E1H0 165 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ANKRD65E5RJM6 399 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ZNF197O14709 1029 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 SUPT3HO75486 399 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 RARGP13631 454 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 WEE1P30291 646 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 GRIK3Q13003 919 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ANKRD20A4Q4UJ75 823 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ANKRD20A8PQ5CZ79 823 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ANKRD20A2Q5SQ80 823 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 ANKRD20A1Q5TYW2 823 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 SZRD1Q7Z422 152 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 MFN1Q8IWA4 741 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 N4BP2L2Q92802 583 aaPredicted RBP15.24■□□□□ 0.03
SYMPK-213ENST00000599460 SPDL1Q96EA4 605 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 WWP1Q9H0M0 922 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 PCDH9Q9HC56 1237 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 PCDHA2Q9Y5H9 948 aa15.24■□□□□ 0.03
SYMPK-213ENST00000599460 OR1E1P30953 314 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 PPM1LQ5SGD2 360 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 SEMA4DQ92854 862 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 EPN3Q9H201 632 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 MRPL17Q9NRX2 175 aaKnown RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 RBM22Q9NW64 420 aaKnown RBP eCLIP15.23■□□□□ 0.032e-7■■■□□ 14.9
SYMPK-213ENST00000599460 CD274Q9NZQ7 290 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 UXTQ9UBK9 157 aaPredicted RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 OPHN1O60890 802 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 HNRNPH2P55795 449 aaKnown RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 HS6ST3Q8IZP7 471 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 XPO6Q96QU8 1125 aaKnown RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 HAUS8Q9BT25 410 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 UPF3AQ9H1J1 476 aaKnown RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 LRRC40Q9H9A6 602 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 CA12O43570 354 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 CCDC22O60826 627 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 PRKCZQ05513 592 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 CRHR2Q13324 411 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 EFTUD2Q15029 972 aaKnown RBP eCLIP15.23■□□□□ 0.034e-6■■■□□ 19.1
SYMPK-213ENST00000599460 C9orf57Q5W0N0 161 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 DCLRE1AQ6PJP8 1040 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 LRRC6Q86X45 466 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 PDZD8Q8NEN9 1154 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 MYLPFQ96A32 169 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 CDC42EP4Q9H3Q1 356 aaKnown RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 TUBGCP4Q9UGJ1 667 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 PCDHGC5Q9Y5F6 944 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 RAMP2O60895 175 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 MYO1DO94832 1006 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 NOS2P35228 1153 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 RGS4P49798 205 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 SIAH1Q8IUQ4 282 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 KATNAL2Q8IYT4 538 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 LRRC52Q8N7C0 313 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 C12orf29Q8N999 325 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 UCMAQ8WVF2 138 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 NPHS2Q9NP85 383 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 MARCOQ9UEW3 520 aaPredicted RBP15.23■□□□□ 0.03
SYMPK-213ENST00000599460 DERAQ9Y315 318 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
SYMPK-213ENST00000599460 YBX3P16989 372 aaKnown RBP eCLIP15.22■□□□□ 0.034e-8■□□□□ 10.4
SYMPK-213ENST00000599460 ANKRD52Q8NB46 1076 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 NCLNQ969V3 563 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 MBOAT7Q96N66 472 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 MRPL45Q9BRJ2 306 aaKnown RBP15.22■□□□□ 0.03
SYMPK-213ENST00000599460 VCX3AQ9NNX9 186 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 HMOX2P30519 316 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 RFC1P35251 1148 aaPredicted RBP15.22■□□□□ 0.03
SYMPK-213ENST00000599460 TBCCQ15814 346 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 SLC35G1Q2M3R5 365 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 PIGZQ86VD9 579 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 LGI2Q8N0V4 545 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 HTR3CQ8WXA8 447 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 TRIM15Q9C019 465 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 PDZD7Q9H5P4 517 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.22■□□□□ 0.03
SYMPK-213ENST00000599460 SEPT4O43236 478 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 TSPAN1O60635 241 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 KRT4P19013 534 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 NR2C2P49116 596 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 SCNN1BP51168 640 aa15.22■□□□□ 0.03
SYMPK-213ENST00000599460 ALDH18A1P54886 795 aaKnown RBP15.22■□□□□ 0.03
SYMPK-213ENST00000599460 MTA1Q13330 715 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms