RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 CNGA2Q16280 664 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 DPCR1Q3MIW9 517 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 HSF5Q4G112 596 aaPredicted RBP15.33■□□□□ 0.04
XRCC1-208ENST00000598422 PM20D1Q6GTS8 502 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 GRAMD4Q6IC98 578 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 GBP6Q6ZN66 633 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 ENOSF1Q7L5Y1 443 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 ETFBKMTQ8IXQ9 262 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 CCDC33Q8N5R6 958 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 GPR161Q8N6U8 529 aaKnown RBP15.33■□□□□ 0.04
XRCC1-208ENST00000598422 KCTD13Q8WZ19 329 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 GOLGA1Q92805 767 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 BHMTQ93088 406 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 FAM81BQ96LP2 452 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 KREMEN1Q96MU8 473 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 CRACR2AQ9BSW2 395 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 THAP9Q9H5L6 903 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 CNGB3Q9NQW8 809 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 POLR3BQ9NW08 1133 aaPredicted RBP15.33■□□□□ 0.04
XRCC1-208ENST00000598422 WDR35Q9P2L0 1181 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 USP18Q9UMW8 372 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 GREB1Q4ZG55 1949 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 DENND4CQ5VZ89 1909 aa15.33■□□□□ 0.04
XRCC1-208ENST00000598422 USP34Q70CQ2 3546 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 GREM1O60565 184 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 KLF8O95600 359 aaPredicted RBP15.32■□□□□ 0.04
XRCC1-208ENST00000598422 TYRP14679 529 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 HOXC13P31276 330 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 TIE1P35590 1138 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 RGS7P49802 495 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 MFAP3P55082 362 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 EXOC3L4Q17RC7 722 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 EOGTQ5NDL2 527 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 C10orf76Q5T2E6 689 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 TRIM65Q6PJ69 517 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 Q6ZNB5 142 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 CLEC17AQ6ZS10 378 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 ALLCQ8N6M5 410 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 TERB1Q8NA31 727 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 GAB3Q8WWW8 586 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 NDRG1Q92597 394 aaKnown RBP15.32■□□□□ 0.04
XRCC1-208ENST00000598422 MARK1Q9P0L2 795 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 MMP17Q9ULZ9 603 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 GPR179Q6PRD1 2367 aa15.32■□□□□ 0.04
XRCC1-208ENST00000598422 FAM186AA6NE01 2351 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 GVINP1Q7Z2Y8 2422 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 RNF225M0QZC1 329 aaPredicted RBP15.31■□□□□ 0.04
XRCC1-208ENST00000598422 PIK3R2O00459 728 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 MED7O43513 233 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 CACNG3O60359 315 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 ALDH1A2O94788 518 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 CYBBP04839 570 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 RETP07949 1114 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
XRCC1-208ENST00000598422 ERCC5P28715 1186 aaPredicted RBP15.31■□□□□ 0.04
XRCC1-208ENST00000598422 USP8P40818 1118 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 TNFRSF4P43489 277 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 HARS2P49590 506 aaKnown RBP15.31■□□□□ 0.04
XRCC1-208ENST00000598422 DGKEP52429 567 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 MESP2Q0VG99 397 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 PKDCCQ504Y2 493 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 BSPRYQ5W0U4 402 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 ANO7Q6IWH7 933 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
XRCC1-208ENST00000598422 FMNL3Q8IVF7 1028 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 SFTPA1Q8IWL2 248 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 TXNDC5Q8NBS9 432 aaKnown RBP15.31■□□□□ 0.04
XRCC1-208ENST00000598422 SLC35F5Q8WV83 523 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 EDEM1Q92611 657 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 PLD4Q96BZ4 506 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 HSFY1Q96LI6 401 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 MED15Q96RN5 788 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 ST7Q9NRC1 585 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 ABCC13Q9NSE7 274 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 APEX2Q9UBZ4 518 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
XRCC1-208ENST00000598422 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
XRCC1-208ENST00000598422 YJEFN3A6XGL0 299 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 E7ENQ6 273 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 PES1O00541 588 aaKnown RBP15.3■□□□□ 0.04
XRCC1-208ENST00000598422 THAP12O43422 761 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 FBXO21O94952 628 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
XRCC1-208ENST00000598422 CALCAP01258 141 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 DMDP11532 3685 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 CHKAP35790 457 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 DAOAP59103 153 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 ZNF638Q14966 1978 aaKnown RBP15.3■□□□□ 0.04
XRCC1-208ENST00000598422 MAN2A1Q16706 1144 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 ARHGAP44Q17R89 818 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 PMF1Q6P1K2 205 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 DENND1CQ8IV53 801 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 ZNF513Q8N8E2 541 aaPredicted RBP15.3■□□□□ 0.04
XRCC1-208ENST00000598422 IL17RCQ8NAC3 791 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 IRGQQ8WZA9 623 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 ZSWIM1Q9BR11 485 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 POLMQ9NP87 494 aaPredicted RBP15.3■□□□□ 0.04
XRCC1-208ENST00000598422 LMBRD1Q9NUN5 540 aa15.3■□□□□ 0.04
XRCC1-208ENST00000598422 BCCIPQ9P287 314 aaKnown RBP eCLIP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms