RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 GOLGA7BQ2TAP0 167 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 EOGTQ5NDL2 527 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 EMC10Q5UCC4 262 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 KBTBD6Q86V97 674 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 IL17RCQ8NAC3 791 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 SRRTQ9BXP5 876 aaKnown RBP24.17■■□□□ 1.46
SSBP4-205ENST00000598159 CHMP5Q9NZZ3 219 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 MARK1Q9P0L2 795 aa24.17■■□□□ 1.46
SSBP4-205ENST00000598159 ANTXRLA6NF34 631 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 STC2O76061 302 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 ALDH1A2O94788 518 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 KLF8O95600 359 aaPredicted RBP24.16■■□□□ 1.46
SSBP4-205ENST00000598159 ZBED1O96006 694 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 STX17P56962 302 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 YWHAGP61981 247 aaKnown RBP eCLIP24.16■■□□□ 1.46
SSBP4-205ENST00000598159 KDSRQ06136 332 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 KCNH2Q12809 1159 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 USP39Q53GS9 565 aaKnown RBP24.16■■□□□ 1.46
SSBP4-205ENST00000598159 Q6ZNB5 142 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 DGLUCYQ7Z3D6 616 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 RASSF3Q86WH2 238 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 MIB1Q86YT6 1006 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 SFTPA1Q8IWL2 248 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 TRIM59Q8IWR1 403 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 ALLCQ8N6M5 410 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 TXNDC5Q8NBS9 432 aaKnown RBP24.16■■□□□ 1.46
SSBP4-205ENST00000598159 EHBP1Q8NDI1 1231 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 LMO3Q8TAP4 145 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 BBS2Q9BXC9 721 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 DCLK3Q9C098 648 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 LRRC4Q9HBW1 653 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 KIAA1468Q9P260 1216 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 PCDHB4Q9Y5E5 795 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 SDK1Q7Z5N4 2213 aa24.16■■□□□ 1.46
SSBP4-205ENST00000598159 RHOBTB1O94844 696 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 TYRP14679 529 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 TMEM270Q6UE05 265 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 TPGS1Q6ZTW0 290 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 TRMT11Q7Z4G4 463 aaKnown RBP24.15■■□□□ 1.46
SSBP4-205ENST00000598159 PPM1KQ8N3J5 372 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 KCTD13Q8WZ19 329 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 CNOT6LQ96LI5 555 aaKnown RBP24.15■■□□□ 1.46
SSBP4-205ENST00000598159 POLMQ9NP87 494 aaPredicted RBP24.15■■□□□ 1.46
SSBP4-205ENST00000598159 RASAL2Q9UJF2 1139 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 STRIP2Q9ULQ0 834 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 STARD13Q9Y3M8 1113 aa24.15■■□□□ 1.46
SSBP4-205ENST00000598159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.15■■□□□ 1.46
SSBP4-205ENST00000598159 NEDD8-MDP1E9PL57 170 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 O00370 1275 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 CACNG3O60359 315 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 SETSIPP0DME0 302 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 CHRM1P11229 460 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-205ENST00000598159 CHKAP35790 457 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 EFEMP1Q12805 493 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 STILQ15468 1287 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 CNGA2Q16280 664 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 PLK5Q496M5 336 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 GRAMD4Q6IC98 578 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 LCLAT1Q6UWP7 414 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 TMEM92Q6UXU6 159 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 PRR23CQ6ZRP0 262 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 RSRC2Q7L4I2 434 aaKnown RBP24.14■■□□□ 1.45
SSBP4-205ENST00000598159 C11orf74Q86VG3 221 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 TERB1Q8NA31 727 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 UBA3Q8TBC4 463 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 ULBP1Q9BZM6 244 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 ARRDC1-AS1Q9H2J1 176 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 DNAJC17Q9NVM6 304 aaKnown RBP24.14■■□□□ 1.45
SSBP4-205ENST00000598159 CDV3Q9UKY7 258 aaKnown RBP24.14■■□□□ 1.45
SSBP4-205ENST00000598159 PCDHGA5Q9Y5G8 931 aa24.14■■□□□ 1.45
SSBP4-205ENST00000598159 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.14■■□□□ 1.45
SSBP4-205ENST00000598159 SGK1O00141 431 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 TULP2O00295 520 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 EPN2O95208 641 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 AFPP02771 609 aaKnown RBP24.13■■□□□ 1.45
SSBP4-205ENST00000598159 GCNT1Q02742 428 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 ELF2Q15723 593 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 PKDCCQ504Y2 493 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 SCML4Q8N228 414 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 IPO9Q96P70 1041 aaKnown RBP24.13■■□□□ 1.45
SSBP4-205ENST00000598159 DUSP15Q9H1R2 295 aaPredicted RBP24.13■■□□□ 1.45
SSBP4-205ENST00000598159 OLA1Q9NTK5 396 aaKnown RBP24.13■■□□□ 1.45
SSBP4-205ENST00000598159 MARCH2Q9P0N8 246 aa24.13■■□□□ 1.45
SSBP4-205ENST00000598159 RNF225M0QZC1 329 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-205ENST00000598159 KLKB1P03952 638 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 ZNF806P0C7X5 589 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 ATXN1P54253 815 aaKnown RBP24.12■■□□□ 1.45
SSBP4-205ENST00000598159 CAMK4Q16566 473 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 C10orf76Q5T2E6 689 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 ANO7Q6IWH7 933 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 ZNF513Q8N8E2 541 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-205ENST00000598159 TFAP2BQ92481 460 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 RTKNQ9BST9 563 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 RWDD2AQ9UIY3 292 aa24.12■■□□□ 1.45
SSBP4-205ENST00000598159 DCHS1Q96JQ0 3298 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 DCLK1O15075 740 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 ADAM23O75077 832 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 RRAGAQ7L523 313 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 SIX6OS1Q8N1H7 587 aa24.11■■□□□ 1.45
SSBP4-205ENST00000598159 MDGA1Q8NFP4 955 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms