RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 E2F8A0AVK6 867 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 MDM4O15151 490 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 HSF2BPO75031 334 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 GZMAP12544 262 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 SKILP12757 684 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 NSFP46459 744 aaKnown RBP21.26■□□□□ 0.99
PNKP-211ENST00000598020 COG7P83436 770 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 GOLGA8FQ08AF8 430 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 SIGLEC14Q08ET2 396 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 GOLGA8DPQ0D2H9 430 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 CC2D1AQ6P1N0 951 aaPredicted RBP21.26■□□□□ 0.99
PNKP-211ENST00000598020 XYLT1Q86Y38 959 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 OSCP1Q8WVF1 389 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 FAM149B1Q96BN6 582 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 PIWIL1Q96J94 861 aaKnown RBP21.26■□□□□ 0.99
PNKP-211ENST00000598020 SLC2A13Q96QE2 648 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 GKN1Q9NS71 199 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 MARCH2Q9P0N8 246 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 CFAP97Q9P2B7 532 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 STRIP2Q9ULQ0 834 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 TECTAO75443 2155 aa21.26■□□□□ 0.99
PNKP-211ENST00000598020 MLLT6P55198 1093 aaPredicted RBP21.25■□□□□ 0.99
PNKP-211ENST00000598020 GSCP56915 257 aaPredicted RBP21.25■□□□□ 0.99
PNKP-211ENST00000598020 EFEMP1Q12805 493 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 PTP4A2Q12974 167 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 PDGFRLQ15198 375 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 ACAD10Q6JQN1 1059 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 HTR3DQ70Z44 454 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 TMC6Q7Z403 805 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 SLC30A5Q8TAD4 765 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 SEPT11Q9NVA2 429 aaKnown RBP21.25■□□□□ 0.99
PNKP-211ENST00000598020 WDR35Q9P2L0 1181 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 RASAL2Q9UJF2 1139 aa21.25■□□□□ 0.99
PNKP-211ENST00000598020 HBS1LQ9Y450 684 aaKnown RBP21.25■□□□□ 0.99
PNKP-211ENST00000598020 MUC3AQ02505 3323 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 SLC9A3R1O14745 358 aaPredicted RBP21.24■□□□□ 0.99
PNKP-211ENST00000598020 GREM1O60565 184 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 MFAP3LO75121 409 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 NCAM1P13591 858 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 C1QBPQ07021 282 aaKnown RBP21.24■□□□□ 0.99
PNKP-211ENST00000598020 TAF5Q15542 800 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 MMS22LQ6ZRQ5 1243 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 ARCQ7LC44 396 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 MIB1Q86YT6 1006 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 CNGA4Q8IV77 575 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 VCPIP1Q96JH7 1222 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 TBC1D14Q9P2M4 693 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 NAALADL1Q9UQQ1 740 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 COL4A2P08572 1712 aa21.24■□□□□ 0.99
PNKP-211ENST00000598020 DDX3XO00571 662 aaKnown RBP eCLIP21.23■□□□□ 0.99
PNKP-211ENST00000598020 CALB1P05937 261 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 KPNA1P52294 538 aaPredicted RBP21.23■□□□□ 0.99
PNKP-211ENST00000598020 NNTQ13423 1086 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 SYPL2Q5VXT5 272 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 WDR59Q6PJI9 974 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 TRIM67Q6ZTA4 783 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 MON1BQ7L1V2 547 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 DQX1Q8TE96 717 aaKnown RBP21.23■□□□□ 0.99
PNKP-211ENST00000598020 PLD4Q96BZ4 506 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 OTUB2Q96DC9 234 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 ASIC4Q96FT7 647 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 ZFYVE19Q96K21 471 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 C11orf70Q9BRQ4 267 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 ABHD10Q9NUJ1 306 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 DUS2Q9NX74 493 aaKnown RBP21.23■□□□□ 0.99
PNKP-211ENST00000598020 ADAM22Q9P0K1 906 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 SH3BP1Q9Y3L3 701 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 F5P12259 2224 aa21.23■□□□□ 0.99
PNKP-211ENST00000598020 DLL1O00548 723 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 CAPN9O14815 690 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 DAB1O75553 588 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 STC2O76061 302 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 GLULP15104 373 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 TRIP4Q15650 581 aaPredicted RBP21.22■□□□□ 0.99
PNKP-211ENST00000598020 TSR1Q2NL82 804 aaKnown RBP21.22■□□□□ 0.99
PNKP-211ENST00000598020 EML3Q32P44 896 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 C2CD6Q53TS8 623 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 TDRD12Q587J7 1177 aaKnown RBP21.22■□□□□ 0.99
PNKP-211ENST00000598020 Q6ZNB5 142 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 VPS36Q86VN1 386 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 DEFB106AQ8N104 65 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 WBP2Q969T9 261 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 DCLK3Q9C098 648 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 EPHX3Q9H6B9 360 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 HPS4Q9NQG7 708 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 ARHGAP20Q9P2F6 1191 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 SFMBT1Q9UHJ3 866 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 TMEM59LQ9UK28 342 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 LSM7Q9UK45 103 aaKnown RBP21.22■□□□□ 0.99
PNKP-211ENST00000598020 ZNF510Q9Y2H8 683 aa21.22■□□□□ 0.99
PNKP-211ENST00000598020 TICRRQ7Z2Z1 1910 aa21.21■□□□□ 0.99
PNKP-211ENST00000598020 SLC12A8A0AV02 714 aa21.21■□□□□ 0.99
PNKP-211ENST00000598020 AKR1B15C9JRZ8 316 aaPredicted RBP21.21■□□□□ 0.99
PNKP-211ENST00000598020 IGLV3-25P01717 112 aa21.21■□□□□ 0.99
PNKP-211ENST00000598020 IGLV3-27P01718 113 aa21.21■□□□□ 0.99
PNKP-211ENST00000598020 NOS2P35228 1153 aa21.21■□□□□ 0.99
PNKP-211ENST00000598020 IFNAR2P48551 515 aa21.21■□□□□ 0.99
PNKP-211ENST00000598020 ADKP55263 362 aaKnown RBP21.21■□□□□ 0.99
PNKP-211ENST00000598020 CDK17Q00537 523 aa21.21■□□□□ 0.99
PNKP-211ENST00000598020 RING1Q06587 406 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms