RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PSAPL1Q6NUJ1 521 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 H2AFVQ71UI9 128 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 CTNNBL1Q8WYA6 563 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 ZNF653Q96CK0 615 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 NELL2Q99435 816 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 SEPT5Q99719 369 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 CLSTN3Q9BQT9 956 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 TSGA10Q9BZW7 698 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 RXFP1Q9HBX9 757 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 TAS2R14Q9NYV8 317 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 STRIP2Q9ULQ0 834 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 PYCARDQ9ULZ3 195 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 NENFQ9UMX5 172 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 PPP2R2CQ9Y2T4 447 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
SHKBP1-213ENST00000597325 ZNF263O14978 683 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 NCAM2O15394 837 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 TEX28O15482 410 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 HRO43593 1189 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 TOP3BO95985 862 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ABCB4P21439 1286 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 CYP2F1P24903 491 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ELF1P32519 619 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 GPD2P43304 727 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 MAGEA11P43364 429 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ACADSBP45954 432 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 PLA2G4AP47712 749 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 VAV2P52735 878 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 RPL10AP62906 217 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ADCY1Q08828 1119 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 RAB33AQ14088 237 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 SF3A2Q15428 464 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 CCDC6Q16204 474 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 MGAT5BQ3V5L5 792 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 STPG1Q5TH74 334 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 VSTM1Q6UX27 236 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 RNF19BQ6ZMZ0 732 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 MMS22LQ6ZRQ5 1243 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 CLEC20AQ6ZU45 233 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 MON1BQ7L1V2 547 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 GET4Q7L5D6 327 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ZNF461Q8TAF7 563 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 PPP1R13BQ96KQ4 1090 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 C11orf70Q9BRQ4 267 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ISCUQ9H1K1 167 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 CYLDQ9NQC7 956 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ADAM22Q9P0K1 906 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 AFF4Q9UHB7 1163 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 INTUQ9ULD6 942 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 MAFFQ9ULX9 164 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 ZKSCAN5Q9Y2L8 839 aa12.66□□□□□ -0.38
SHKBP1-213ENST00000597325 MTCL1Q9Y4B5 1905 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 ANKRD62A6NC57 917 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 PRRG1O14668 218 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 TMEM253P0C7T8 217 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 MMP8P22894 467 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 RGS7P49802 495 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 GALCP54803 685 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 KIF5AQ12840 1032 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 ARHGAP29Q52LW3 1261 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 ELMSAN1Q6PJG2 1045 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 PIGZQ86VD9 579 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 MCOLN2Q8IZK6 566 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 ATAD1Q8NBU5 361 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 SLC35F5Q8WV83 523 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 VCPIP1Q96JH7 1222 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 HSFY1Q96LI6 401 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 CPXM1Q96SM3 734 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 SMOQ99835 787 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 CHRDQ9H2X0 955 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 CYP4F11Q9HBI6 524 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 CSNK1G1Q9HCP0 422 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 PNPLA8Q9NP80 782 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 HSFX1Q9UBD0 423 aa12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 REXO2Q9Y3B8 237 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-213ENST00000597325 F5P12259 2224 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 GOLGA6L9A6NEM1 432 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 E5RJQ4 531 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 F8VP50 259 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 TULP2O00295 520 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 GIPC1O14908 333 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 KRT86O43790 486 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 ABLIM3O94929 683 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 GLUD1P00367 558 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 ZNF806P0C7X5 589 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms