RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 ERBB2P04626 1255 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 CHRNB2P17787 502 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 GJA4P35212 333 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 BPIFB4P59827 614 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 PON2Q15165 354 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 PDGFRLQ15198 375 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 GAB4Q2WGN9 574 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 PTPN20Q4JDL3 420 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 RHBDF2Q6PJF5 856 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 ARHGAP18Q8N392 663 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 ZNF276Q8N554 614 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 PPP1R13BQ96KQ4 1090 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 MARCH2Q9P0N8 246 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 NAALADL1Q9UQQ1 740 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 SH3BP1Q9Y3L3 701 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 VPS13AQ96RL7 3174 aa16.1■□□□□ 0.17
USE1-206ENST00000595101 ZNF318Q5VUA4 2279 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 SLC12A8A0AV02 714 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 E2F8A0AVK6 867 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 GOLGA6L19H0YKK7 550 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 CYP17A1P05093 508 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 STAT1P42224 750 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 MESP2Q0VG99 397 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 FILIP1LQ4L180 1135 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 SYPL2Q5VXT5 272 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 HTR3DQ70Z44 454 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 FMNL3Q8IVF7 1028 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 CPA5Q8WXQ8 436 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 BAP1Q92560 729 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 ATP2A3Q93084 1043 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
USE1-206ENST00000595101 ABCC13Q9NSE7 274 aa16.09■□□□□ 0.17
USE1-206ENST00000595101 GRAP2O75791 330 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 CAVIN2O95810 425 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 ACADSBP45954 432 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 UBASH3AP57075 661 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 PITX1P78337 314 aaPredicted RBP16.08■□□□□ 0.17
USE1-206ENST00000595101 FMO1Q01740 532 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 DHCR24Q15392 516 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 Q6ZNB5 142 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 C12orf40Q86WS4 652 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 DDX42Q86XP3 938 aaKnown RBP eCLIP16.08■□□□□ 0.17
USE1-206ENST00000595101 ADAM32Q8TC27 787 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 IRGQQ8WZA9 623 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 FAM149B1Q96BN6 582 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 IFNKQ9P0W0 207 aa16.08■□□□□ 0.17
USE1-206ENST00000595101 KIF26AQ9ULI4 1882 aaPredicted RBP16.08■□□□□ 0.16
USE1-206ENST00000595101 MAN2B1O00754 1011 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 FBXO21O94952 628 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 NCAM1P13591 858 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 PBX1P40424 430 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 GALK1P51570 392 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 LY6G5CQ5SRR4 150 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 E4F1Q66K89 784 aaPredicted RBP16.08■□□□□ 0.16
USE1-206ENST00000595101 FAM183BPQ6ZVS7 135 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 RALGPS2Q86X27 583 aaPredicted RBP16.08■□□□□ 0.16
USE1-206ENST00000595101 TMEM25Q86YD3 366 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 RNF139Q8WU17 664 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 PDCL3Q9H2J4 239 aa16.08■□□□□ 0.16
USE1-206ENST00000595101 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 CHRNB1P11230 501 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 CDH5P33151 784 aaPredicted RBP16.07■□□□□ 0.16
USE1-206ENST00000595101 SLC6A11P48066 632 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 TPM4P67936 248 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 NAA35Q5VZE5 725 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 CACNA2D4Q7Z3S7 1137 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 TADA2BQ86TJ2 420 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 SFTPA1Q8IWL2 248 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 PIAS4Q8N2W9 510 aaPredicted RBP16.07■□□□□ 0.16
USE1-206ENST00000595101 CPA6Q8N4T0 437 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 PRSS33Q8NF86 280 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 EZH1Q92800 747 aaPredicted RBP16.07■□□□□ 0.16
USE1-206ENST00000595101 BHMTQ93088 406 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 CDK5RAP1Q96SZ6 601 aaKnown RBP16.07■□□□□ 0.16
USE1-206ENST00000595101 TTYH3Q9C0H2 523 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 LMAN1LQ9HAT1 526 aa16.07■□□□□ 0.16
USE1-206ENST00000595101 AGO1Q9UL18 857 aaKnown RBP16.07■□□□□ 0.16
USE1-206ENST00000595101 HELZP42694 1942 aaKnown RBP16.06■□□□□ 0.16
USE1-206ENST00000595101 LRRC53A6NM62 1247 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 TRIM24O15164 1050 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 NFATC1O95644 943 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 CORO1AP31146 461 aaKnown RBP16.06■□□□□ 0.16
USE1-206ENST00000595101 OPRD1P41143 372 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 MLLT6P55198 1093 aaPredicted RBP16.06■□□□□ 0.16
USE1-206ENST00000595101 NOMO3P69849 1222 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 COG7P83436 770 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 CDR2Q01850 454 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 GAS6Q14393 721 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 SMYD5Q6GMV2 418 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 OR6B2Q6IFH4 312 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 OLFML1Q6UWY5 402 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 Q6ZS52 159 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 TPGS1Q6ZTW0 290 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 IRF2BP2Q7Z5L9 587 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 PHLDB2Q86SQ0 1253 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 DENND1CQ8IV53 801 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 TMEM35BQ8NCS4 154 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 SLC30A5Q8TAD4 765 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms