RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 CYP1A1P04798 512 aaPredicted RBP12.7□□□□□ -0.38
LIG1-207ENST00000594759 RXRGP48443 463 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 INPP5AQ14642 412 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 AKAP14Q86UN6 197 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 HORMAD1Q86X24 394 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
LIG1-207ENST00000594759 XXYLT1Q8NBI6 393 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 PIWIL2Q8TC59 973 aaKnown RBP12.7□□□□□ -0.38
LIG1-207ENST00000594759 ACCSQ96QU6 501 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 TMEM121Q9BTD3 319 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 FGFBP2Q9BYJ0 223 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 TLE6Q9H808 572 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 IP6K2Q9UHH9 426 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 EIF3EP60228 445 aaKnown RBP12.7□□□□□ -0.38
LIG1-207ENST00000594759 RPL10AP62906 217 aaKnown RBP12.7□□□□□ -0.38
LIG1-207ENST00000594759 PPATQ06203 517 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 CGB2Q6NT52 195 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 RUSC1Q9BVN2 902 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 RAD21L1Q9H4I0 556 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 SLC8A2Q9UPR5 921 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
LIG1-207ENST00000594759 MYOCOSA0A1B0GUC4 107 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 PSMD11O00231 422 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 BMPR2Q13873 1038 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 TRIM25Q14258 630 aaKnown RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 DCAF12L1Q5VU92 463 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 PODNQ7Z5L7 613 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 MYO1HQ8N1T3 1032 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 NCSTNQ92542 709 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 DLG3Q92796 817 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 EPB41L4BQ9H329 900 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 PNMA6FA0A0J9YX94 578 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 H6PDO95479 791 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 POLR2BP30876 1174 aaKnown RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 RALGDSQ12967 914 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 ATG14Q6ZNE5 492 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 CHID1Q9BWS9 393 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 AKAP12Q02952 1782 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 FAM208AQ9UK61 1670 aaKnown RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 NFIBO00712 420 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 RPL26P61254 145 aaKnown RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 POU5F1Q01860 360 aaKnown RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 BNIP3Q12983 259 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 ZNF846Q147U1 533 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 LDLRAP1Q5SW96 308 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 LAYNQ6UX15 382 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 C11orf74Q86VG3 221 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 ZSWIM2Q8NEG5 633 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 MECRQ9BV79 373 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 IGSF9Q9P2J2 1179 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 DSEQ9UL01 958 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 SPEF1Q9Y4P9 236 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 MYO1DO94832 1006 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 ALBP02768 609 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 EVX2Q03828 476 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 FASTKD1Q53R41 847 aaKnown RBP12.69□□□□□ -0.38
LIG1-207ENST00000594759 ARSHQ5FYA8 562 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 PPM1LQ5SGD2 360 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 PALB2Q86YC2 1186 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 CCNYL1Q8N7R7 359 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 POMGNT1Q8WZA1 660 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 GLMNQ92990 594 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 DNAJC19Q96DA6 116 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 ORC6Q9Y5N6 252 aa12.69□□□□□ -0.38
LIG1-207ENST00000594759 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 PCP4L1A6NKN8 68 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 CRCPO75575 148 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 IFNA8P32881 189 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 S100A5P33763 92 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 SLC1A6P48664 564 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 SLC12A2P55011 1212 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 TJAP1Q5JTD0 557 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 ACAD10Q6JQN1 1059 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 SNX32Q86XE0 403 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 NEDD1Q8NHV4 660 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 RAB6BQ9NRW1 208 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 FAM32AQ9Y421 112 aaKnown RBP12.68□□□□□ -0.38
LIG1-207ENST00000594759 SNPHO15079 494 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 SERPINB9P50453 376 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 GNA12Q03113 381 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 CTC1Q2NKJ3 1217 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 DCLK2Q8N568 766 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 DACT3Q96B18 629 aaPredicted RBP12.68□□□□□ -0.38
LIG1-207ENST00000594759 PTCD3Q96EY7 689 aaKnown RBP12.68□□□□□ -0.38
LIG1-207ENST00000594759 GNPTGQ9UJJ9 305 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 DNPEPQ9ULA0 475 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 CCDC162PA2VCL2 907 aa12.68□□□□□ -0.38
LIG1-207ENST00000594759 RAD51BO15315 384 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms