RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 LETM1O95202 739 aaPredicted RBP18.18■□□□□ 0.5
IRF3-208ENST00000594387 CYBBP04839 570 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 GNA15P30679 374 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 HOXA6P31267 233 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 GRIA2P42262 883 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 ACADSBP45954 432 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 SLC6A11P48066 632 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 FNTBP49356 437 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 SEC13P55735 322 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 MRPS21P82921 87 aaKnown RBP18.18■□□□□ 0.5
IRF3-208ENST00000594387 KDSRQ06136 332 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 KCNJ12Q14500 433 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 C2orf27AQ580R0 203 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 HSP90AA4PQ58FG1 418 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 BSPRYQ5W0U4 402 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 SMYD5Q6GMV2 418 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 PRR23BQ6ZRT6 265 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 TPGS1Q6ZTW0 290 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 SYT13Q7L8C5 426 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 IRF2BP1Q8IU81 584 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 SCML4Q8N228 414 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 ANKRD20A12PQ8NF67 263 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 IRGQQ8WZA9 623 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 MED15Q96RN5 788 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 GMEB2Q9UKD1 530 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 WDFY4Q6ZS81 3184 aa18.18■□□□□ 0.5
IRF3-208ENST00000594387 SPAG17Q6Q759 2223 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 NEDD8-MDP1E9PL57 170 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 HOXC11O43248 304 aaPredicted RBP18.17■□□□□ 0.5
IRF3-208ENST00000594387 SART1O43290 800 aaKnown RBP18.17■□□□□ 0.5
IRF3-208ENST00000594387 STC2O76061 302 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 EEF1GP26641 437 aaKnown RBP18.17■□□□□ 0.5
IRF3-208ENST00000594387 PON1P27169 355 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 TNFRSF4P43489 277 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 HARS2P49590 506 aaKnown RBP18.17■□□□□ 0.5
IRF3-208ENST00000594387 ZNF132P52740 706 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 PTK2Q05397 1052 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 SIM2Q14190 667 aaPredicted RBP18.17■□□□□ 0.5
IRF3-208ENST00000594387 PKDCCQ504Y2 493 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 NAIF1Q69YI7 327 aaPredicted RBP18.17■□□□□ 0.5
IRF3-208ENST00000594387 PMF1Q6P1K2 205 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 CEP68Q76N32 757 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 TMEM25Q86YD3 366 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 GPT2Q8TD30 523 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 ZNF606Q8WXB4 792 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 PLD4Q96BZ4 506 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 TRIM62Q9BVG3 475 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 EPC1Q9H2F5 836 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 ANO10Q9NW15 660 aa18.17■□□□□ 0.5
IRF3-208ENST00000594387 PIEZO1Q92508 2521 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 CCDC163A0A0D9SF12 145 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 K7EQS6 105 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 K7ESF4 209 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 TULP3O75386 442 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 TDGF1P13385 188 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 TYRP14679 529 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 CORO1AP31146 461 aaKnown RBP18.16■□□□□ 0.5
IRF3-208ENST00000594387 SNX16P57768 344 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 DAOAP59103 153 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 DMC1Q14565 340 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 MEA1Q16626 185 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 HSF5Q4G112 596 aaPredicted RBP18.16■□□□□ 0.5
IRF3-208ENST00000594387 GRAMD4Q6IC98 578 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 TRMT11Q7Z4G4 463 aaKnown RBP18.16■□□□□ 0.5
IRF3-208ENST00000594387 WDR5BQ86VZ2 330 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 ENOX1Q8TC92 643 aaKnown RBP18.16■□□□□ 0.5
IRF3-208ENST00000594387 USP33Q8TEY7 942 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 NDRG1Q92597 394 aaKnown RBP18.16■□□□□ 0.5
IRF3-208ENST00000594387 EDEM1Q92611 657 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 WBP2Q969T9 261 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 NOX5Q96PH1 765 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 MIS12Q9H081 205 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 DNAJC17Q9NVM6 304 aaKnown RBP18.16■□□□□ 0.5
IRF3-208ENST00000594387 DNAJC12Q9UKB3 198 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 SMG5Q9UPR3 1016 aaKnown RBP18.16■□□□□ 0.5
IRF3-208ENST00000594387 NFE2L3Q9Y4A8 694 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 EML5Q05BV3 1969 aa18.16■□□□□ 0.5
IRF3-208ENST00000594387 A0A0A0MRY4 1105 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 YJEFN3A6XGL0 299 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 E7ENQ6 273 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 PIK3R2O00459 728 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 ZBTB24O43167 697 aaPredicted RBP18.15■□□□□ 0.5
IRF3-208ENST00000594387 ALDH1A2O94788 518 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 APBB3O95704 486 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 LTFP02788 710 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 BPIFB4P59827 614 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 GAB4Q2WGN9 574 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 TCP11X2Q5H9J9 407 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 EOGTQ5NDL2 527 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 SDE2Q6IQ49 451 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 PKN3Q6P5Z2 889 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 GJB7Q6PEY0 223 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 DENND1CQ8IV53 801 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 FMNL3Q8IVF7 1028 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 GPR161Q8N6U8 529 aaKnown RBP18.15■□□□□ 0.5
IRF3-208ENST00000594387 SUMF1Q8NBK3 374 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 TSTD1Q8NFU3 115 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 KCNV2Q8TDN2 545 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 PDCL3Q9H2J4 239 aa18.15■□□□□ 0.5
IRF3-208ENST00000594387 SAMSN1Q9NSI8 373 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms