RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 LTFP02788 710 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 CYP17A1P05093 508 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 GJA4P35212 333 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 SOX5P35711 763 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 MAGEA9P43362 315 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 RPS9P46781 194 aaKnown RBP15.25■□□□□ 0.03
VRK3-206ENST00000594090 NR1H3Q13133 447 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 PON2Q15165 354 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 HTR3DQ70Z44 454 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 TMEM110Q86TL2 294 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 PRSS33Q8NF86 280 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 EPS8L1Q8TE68 723 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 DDX1Q92499 740 aaKnown RBP15.25■□□□□ 0.03
VRK3-206ENST00000594090 EDEM1Q92611 657 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 CLDN23Q96B33 292 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 OTUB2Q96DC9 234 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 SPAG5Q96R06 1193 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 CPXM1Q96SM3 734 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 TJP2Q9UDY2 1190 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 STRIP2Q9ULQ0 834 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 CEP83Q9Y592 693 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 ZDBF2Q9HCK1 2354 aa15.25■□□□□ 0.03
VRK3-206ENST00000594090 PAPSS1O43252 624 aaPredicted RBP15.24■□□□□ 0.03
VRK3-206ENST00000594090 SART1O43290 800 aaKnown RBP15.24■□□□□ 0.03
VRK3-206ENST00000594090 STC2O76061 302 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 COG7P83436 770 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 AMPD2Q01433 879 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 DHCR24Q15392 516 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 GAB4Q2WGN9 574 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 MSANTD2Q6P1R3 559 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 NOP9Q86U38 636 aaKnown RBP15.24■□□□□ 0.03
VRK3-206ENST00000594090 SCUBE3Q8IX30 993 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 ADGRG2Q8IZP9 1017 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 RNF139Q8WU17 664 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 GOLGA1Q92805 767 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 PPP1R13BQ96KQ4 1090 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 NOX5Q96PH1 765 aa15.24■□□□□ 0.03
VRK3-206ENST00000594090 SLC12A8A0AV02 714 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 GOLGA6L19H0YKK7 550 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 ADH1CP00326 375 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 SERPINC1P01008 464 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 HMBSP08397 361 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 CHRNB1P11230 501 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 CDH5P33151 784 aaPredicted RBP15.23■□□□□ 0.03
VRK3-206ENST00000594090 STAT1P42224 750 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 TMEM196Q5HYL7 178 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 TAF3Q5VWG9 929 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 NAIF1Q69YI7 327 aaPredicted RBP15.23■□□□□ 0.03
VRK3-206ENST00000594090 Q6ZNB5 142 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 FMNL3Q8IVF7 1028 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 FAM149B1Q96BN6 582 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 NAP1L5Q96NT1 182 aaPredicted RBP15.23■□□□□ 0.03
VRK3-206ENST00000594090 PDCL3Q9H2J4 239 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 SFMBT1Q9UHJ3 866 aa15.23■□□□□ 0.03
VRK3-206ENST00000594090 NOCTQ9UK39 431 aaKnown RBP15.23■□□□□ 0.03
VRK3-206ENST00000594090 ARIH1Q9Y4X5 557 aaPredicted RBP15.23■□□□□ 0.03
VRK3-206ENST00000594090 KIAA1549LQ6ZVL6 1849 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 A0A1W2PQC6 194 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 TRDMT1O14717 391 aaKnown RBP15.22■□□□□ 0.03
VRK3-206ENST00000594090 KLKB1P03952 638 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 FYNP06241 537 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 MMEP08473 750 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 ADH5P11766 374 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 CORO1AP31146 461 aaKnown RBP15.22■□□□□ 0.03
VRK3-206ENST00000594090 FANCCQ00597 558 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 TCF15Q12870 199 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 CCINQ13939 588 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 LRRC32Q14392 662 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 PTPN20Q4JDL3 420 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 LY6G5CQ5SRR4 150 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 FSTL4Q6MZW2 842 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 RHBDF2Q6PJF5 856 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 ZNF677Q86XU0 584 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 TMEM35BQ8NCS4 154 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 SLC20A1Q8WUM9 679 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 CD101Q93033 1021 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 PLD4Q96BZ4 506 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 PIWIL1Q96J94 861 aaKnown RBP15.22■□□□□ 0.03
VRK3-206ENST00000594090 P2RY13Q9BPV8 354 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 CHRDQ9H2X0 955 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 LMAN1LQ9HAT1 526 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 SPHK2Q9NRA0 654 aa15.22■□□□□ 0.03
VRK3-206ENST00000594090 RBM12Q9NTZ6 932 aaKnown RBP15.22■□□□□ 0.03
VRK3-206ENST00000594090 HBS1LQ9Y450 684 aaKnown RBP15.22■□□□□ 0.03
VRK3-206ENST00000594090 MSI1O43347 362 aaKnown RBP15.21■□□□□ 0.03
VRK3-206ENST00000594090 LSM8O95777 96 aaKnown RBP15.21■□□□□ 0.03
VRK3-206ENST00000594090 ERBB2P04626 1255 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 NCAM1P13591 858 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 OPRD1P41143 372 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 PTPN5P54829 565 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 GRSF1Q12849 480 aaKnown RBP eCLIP15.21■□□□□ 0.03
VRK3-206ENST00000594090 NR1I3Q14994 352 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 FAM183BPQ6ZVS7 135 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 BEND5Q7L4P6 421 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 CACNA2D4Q7Z3S7 1137 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 IPO4Q8TEX9 1081 aaKnown RBP15.21■□□□□ 0.03
VRK3-206ENST00000594090 EXOC4Q96A65 974 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 IER2Q9BTL4 223 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 TRIM62Q9BVG3 475 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms