RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 LRRTM2O43300 516 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 JAK2O60674 1132 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 NEBLO76041 1014 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 OAZ2O95190 189 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 CBX6O95503 412 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 F9P00740 461 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 GP1BAP07359 652 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 NFICP08651 508 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 JMJD7P0C870 316 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 HAPLN1P10915 354 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 PCP11498 1178 aaKnown RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 TCF3P15923 654 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 LIG1P18858 919 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 HDCP19113 662 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 DGKAP23743 735 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 PRKCHP24723 683 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 MARCKSP29966 332 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 MAPK10P53779 464 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 OSTNP61366 133 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 PPP2R2AP63151 447 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 GAD2Q05329 585 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 RUNX1T1Q06455 604 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 CDC20Q12834 499 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ZNF177Q13360 481 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 KCNJ12Q14500 433 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 STARD3Q14849 445 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ANO4Q32M45 955 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ZRANB3Q5FWF4 1079 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 MIIPQ5JXC2 388 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 JAKMIP3Q5VZ66 844 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 BTBD8Q5XKL5 378 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 KIAA0895LQ68EN5 471 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 GRAMD4Q6IC98 578 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 TCTN3Q6NUS6 607 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 MIER3Q7Z3K6 550 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 HEATR3Q7Z4Q2 680 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 USP37Q86T82 979 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 TMEM25Q86YD3 366 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 IFNLR1Q8IU57 520 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 ITPRIPQ8IWB1 547 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 SIRT2Q8IXJ6 389 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 CCDC13Q8IYE1 715 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ADGRF2Q8IZF7 708 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 SRBD1Q8N5C6 995 aaKnown RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 SCFD1Q8WVM8 642 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 APOBEC4Q8WW27 367 aaKnown RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 NRGNQ92686 78 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 USP7Q93009 1102 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 WBP2Q969T9 261 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 CEP170P1Q96L14 293 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 FAM227BQ96M60 508 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 CATSPER2Q96P56 530 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 SLITRK1Q96PX8 696 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 JPH2Q9BR39 696 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 SPZ1Q9BXG8 430 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 SLC29A3Q9BZD2 475 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 IRX2Q9BZI1 471 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 BTBD1Q9H0C5 482 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 LHX5Q9H2C1 402 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 RPF1Q9H9Y2 349 aaKnown RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 XPNPEP1Q9NQW7 623 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ABI2Q9NYB9 513 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 CFAP97Q9P2B7 532 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 WRAP73Q9P2S5 460 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 TUBGCP4Q9UGJ1 667 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 CPQQ9Y646 472 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ZNF891A8MT65 544 aaPredicted RBP3.28□□□□□ -1.88
VRK3-204ENST00000593912 H3BM21 787 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 M0QZQ0 153 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 GFRA2O00451 464 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 PPEF2O14830 753 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 MSH4O15457 936 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ASAP2O43150 1006 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 HOXC11O43248 304 aaPredicted RBP3.28□□□□□ -1.88
VRK3-204ENST00000593912 GAS7O60861 476 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 RAB11FIP3O75154 756 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 RLBP1P12271 317 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 VAV1P15498 845 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 RXRAP19793 462 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 CAPN3P20807 821 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 GLRA2P23416 452 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ITGA3P26006 1051 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ARSDP51689 593 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 GUCY2FP51841 1108 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 JAK3P52333 1124 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 KRT83P78385 493 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 ADAM9Q13443 819 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 SEPT6Q14141 434 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 SPIDRQ14159 915 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 MYBPC2Q14324 1141 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 DHX8Q14562 1220 aaKnown RBP3.28□□□□□ -1.88
VRK3-204ENST00000593912 PCBP1Q15365 356 aaKnown RBP eCLIP3.28□□□□□ -1.88
VRK3-204ENST00000593912 DDR2Q16832 855 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 TMEM132AQ24JP5 1023 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 SEZ6Q53EL9 994 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 HS1BP3Q53T59 392 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 LRCH2Q5VUJ6 765 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 CEP135Q66GS9 1140 aa3.28□□□□□ -1.88
VRK3-204ENST00000593912 WWC2Q6AWC2 1192 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms