RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 IPO4Q8TEX9 1081 aaKnown RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 WBP2Q969T9 261 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ASB16Q96NS5 453 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 EIF3CQ99613 913 aaKnown RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 TTLL2Q9BWV7 592 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ISCUQ9H1K1 167 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 GOLPH3Q9H4A6 298 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 CCSER2Q9H7U1 834 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ZFP14Q9HCL3 533 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 OSGEPQ9NPF4 335 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 IL37Q9NZH6 218 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 CNOT8Q9UFF9 292 aaKnown RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ASB3Q9Y575 518 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 CEP83Q9Y592 693 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 PCDHA13Q9Y5I0 950 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 BZW2Q9Y6E2 419 aaKnown RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 DUSP10Q9Y6W6 482 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ZNF638Q14966 1978 aaKnown RBP10.1□□□□□ -0.79
DDX39A-220ENST00000593008 FAM92AA1XBS5 289 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 ZNF840PA6NDX5 716 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 MSI1O43347 362 aaKnown RBP10.1□□□□□ -0.79
DDX39A-220ENST00000593008 RTN2O75298 545 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 ECI2O75521 394 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 F11P03951 625 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 AVPR2P30518 371 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 ARHGAP25P42331 645 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 MAGEA1P43355 309 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 GABRB2P47870 512 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 ATXN1P54253 815 aaKnown RBP10.1□□□□□ -0.79
DDX39A-220ENST00000593008 RNASE9P60153 205 aaKnown RBP10.1□□□□□ -0.79
DDX39A-220ENST00000593008 YWHAGP61981 247 aaKnown RBP eCLIP10.1□□□□□ -0.79
DDX39A-220ENST00000593008 C1QBPQ07021 282 aaKnown RBP10.1□□□□□ -0.79
DDX39A-220ENST00000593008 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 GPR158Q5T848 1215 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 SH3PXD2AQ5TCZ1 1133 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 SYPL2Q5VXT5 272 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 TXNDC8Q6A555 127 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 DNAJC24Q6P3W2 148 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 VPS36Q86VN1 386 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 FMNL3Q8IVF7 1028 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 TMEM105Q8N8V8 129 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 RIN3Q8TB24 985 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 STK32AQ8WU08 396 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 SMARCD2Q92925 531 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 C18orf8Q96DM3 657 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 RSPRY1Q96DX4 576 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 HSFY1Q96LI6 401 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 MCEEQ96PE7 176 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 GCNAQ96QF7 691 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 TRPC7Q9HCX4 862 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 PNPLA8Q9NP80 782 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 ARHGEF3Q9NR81 526 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 SLC2A4RGQ9NR83 387 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 NAALADL1Q9UQQ1 740 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 SCML2Q9UQR0 700 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 ADGRG1Q9Y653 693 aa10.1□□□□□ -0.79
DDX39A-220ENST00000593008 SYNJ2BP-COX16A0A087WUM0 186 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 TMEM110-MUSTN1A8MSY1 372 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 ARHGAP6O43182 974 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 PI15O43692 258 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 DAB1O75553 588 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 PRAMEF12O95522 483 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 FGF19O95750 216 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 H2AFZP0C0S5 128 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 ZDHHC11BP0C7U3 371 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 GZMAP12544 262 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 TCF4P15884 667 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 RFC1P35251 1148 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 CYLC1P35663 651 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 SLC8A3P57103 927 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 SLC6A3Q01959 620 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 MAMLD1Q13495 774 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 C15orf59Q2T9L4 293 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 ARHGAP15Q53QZ3 475 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 CWF19L1Q69YN2 538 aaKnown RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 PM20D1Q6GTS8 502 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 VITQ6UXI7 678 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 H2AFVQ71UI9 128 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 TAC4Q86UU9 113 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 ARID3BQ8IVW6 561 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 CCDC170Q8IYT3 715 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 DEFB106AQ8N104 65 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 CCDC112Q8NEF3 446 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 ELSPBP1Q96BH3 223 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 FAM149B1Q96BN6 582 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 TRMT2BQ96GJ1 504 aaKnown RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 MYRFLQ96LU7 910 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 NOX5Q96PH1 765 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 CYP2S1Q96SQ9 504 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 NUP85Q9BW27 656 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 UBXN6Q9BZV1 441 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 TBC1D17Q9HA65 648 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 CNGB3Q9NQW8 809 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
DDX39A-220ENST00000593008 COX16Q9P0S2 106 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 HYOU1Q9Y4L1 999 aa10.09□□□□□ -0.79
DDX39A-220ENST00000593008 MUC6Q6W4X9 2439 aa10.08□□□□□ -0.8
DDX39A-220ENST00000593008 HEPACAM2A8MVW5 462 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms