RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 HMGB4Q8WW32 186 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 RLN3Q8WXF3 142 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 TCEAL3Q969E4 200 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 DNAJC17Q9NVM6 304 aaKnown RBP16.92■□□□□ 0.3
CIRBP-240ENST00000592815 BCCIPQ9P287 314 aaKnown RBP eCLIP16.92■□□□□ 0.3
CIRBP-240ENST00000592815 SPAG17Q6Q759 2223 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 SLC16A3O15427 465 aaKnown RBP16.91■□□□□ 0.3
CIRBP-240ENST00000592815 MAP3K13O43283 966 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 TYRP14679 529 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 KCNA4P22459 653 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 PMS2CLQ68D20 193 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 ARHGAP17Q68EM7 881 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 ISM2Q6H9L7 571 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 TERB1Q8NA31 727 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 OLIG1Q8TAK6 271 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 KCNV2Q8TDN2 545 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 XPO6Q96QU8 1125 aaKnown RBP16.91■□□□□ 0.3
CIRBP-240ENST00000592815 UBXN6Q9BZV1 441 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 CLIC5Q9NZA1 410 aa16.91■□□□□ 0.3
CIRBP-240ENST00000592815 ARMCX3Q9UH62 379 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-240ENST00000592815 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
CIRBP-240ENST00000592815 TCRBV21S2A2A0A5A6 115 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 TRIM49BA6NDI0 452 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 STC2O76061 302 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 WASP42768 502 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 DHPSP49366 369 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-240ENST00000592815 SLC8A3P57103 927 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 LRMPQ12912 555 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 Q6ZNB5 142 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 TRMT11Q7Z4G4 463 aaKnown RBP16.9■□□□□ 0.3
CIRBP-240ENST00000592815 PIGZQ86VD9 579 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 ZC3H3Q8IXZ2 948 aaKnown RBP16.9■□□□□ 0.3
CIRBP-240ENST00000592815 ZNF276Q8N554 614 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 FRMD1Q8N878 549 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 ANKRD52Q8NB46 1076 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 DDX1Q92499 740 aaKnown RBP16.9■□□□□ 0.3
CIRBP-240ENST00000592815 BHMTQ93088 406 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 CDK5RAP1Q96SZ6 601 aaKnown RBP16.9■□□□□ 0.3
CIRBP-240ENST00000592815 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
CIRBP-240ENST00000592815 MARK1Q9P0L2 795 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 HCN2Q9UL51 889 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 COQ4Q9Y3A0 265 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 STARD13Q9Y3M8 1113 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 ABCA7Q8IZY2 2146 aa16.9■□□□□ 0.3
CIRBP-240ENST00000592815 MYH10P35580 1976 aa16.89■□□□□ 0.3
CIRBP-240ENST00000592815 MYO16Q9Y6X6 1858 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 TM4SF5O14894 197 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 CACNG3O60359 315 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 KLKB1P03952 638 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 HMBSP08397 361 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 NTSR1P30989 418 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 P2RY2P41231 377 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 COG7P83436 770 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 CUL2Q13617 745 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 RNF43Q68DV7 783 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 ARHGAP18Q8N392 663 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 SPACA7Q96KW9 195 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 FAM124BQ9H5Z6 455 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-240ENST00000592815 PLK2Q9NYY3 685 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 RASAL2Q9UJF2 1139 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 EML5Q05BV3 1969 aa16.89■□□□□ 0.29
CIRBP-240ENST00000592815 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 PRRT4C9JH25 899 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 ADRB1P08588 477 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 CISD3P0C7P0 127 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 TKTL1P51854 596 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 YWHAGP61981 247 aaKnown RBP eCLIP16.88■□□□□ 0.29
CIRBP-240ENST00000592815 STIM1Q13586 685 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
CIRBP-240ENST00000592815 GOLGA7BQ2TAP0 167 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 SGO2Q562F6 1265 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 RAB41Q5JT25 222 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 EGFLAMQ63HQ2 1017 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 SDE2Q6IQ49 451 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 RSRC2Q7L4I2 434 aaKnown RBP16.88■□□□□ 0.29
CIRBP-240ENST00000592815 LPCAT2Q7L5N7 544 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 CYP2U1Q7Z449 544 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 TMEFF1Q8IYR6 380 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 NDRG1Q92597 394 aaKnown RBP16.88■□□□□ 0.29
CIRBP-240ENST00000592815 PIGKQ92643 395 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 SLC35C1Q96A29 364 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 DHTKD1Q96HY7 919 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-240ENST00000592815 ACOX2Q99424 681 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 MBD1Q9UIS9 605 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-240ENST00000592815 ZNF510Q9Y2H8 683 aa16.88■□□□□ 0.29
CIRBP-240ENST00000592815 CNOT1A5YKK6 2376 aaKnown RBP16.87■□□□□ 0.29
CIRBP-240ENST00000592815 KIAA1549LQ6ZVL6 1849 aa16.87■□□□□ 0.29
CIRBP-240ENST00000592815 TULP2O00295 520 aa16.87■□□□□ 0.29
CIRBP-240ENST00000592815 PSMA7O14818 248 aa16.87■□□□□ 0.29
CIRBP-240ENST00000592815 KHNYNO15037 678 aaKnown RBP16.87■□□□□ 0.29
CIRBP-240ENST00000592815 ZBTB24O43167 697 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-240ENST00000592815 ZBED1O96006 694 aa16.87■□□□□ 0.29
CIRBP-240ENST00000592815 HOXB2P14652 356 aa16.87■□□□□ 0.29
CIRBP-240ENST00000592815 CD19P15391 556 aa16.87■□□□□ 0.29
CIRBP-240ENST00000592815 DGKGP49619 791 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms