RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 KIAA1257Q9ULG3 409 aa14.57□□□□□ -0.08
APOC1-208ENST00000592535 ZNF292O60281 2723 aa14.57□□□□□ -0.08
APOC1-208ENST00000592535 A0A0A0MRY4 1105 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 NEDD8-MDP1E9PL57 170 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 TRIM24O15164 1050 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 AXIN1O15169 862 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 RPP40O75818 363 aaKnown RBP14.56□□□□□ -0.08
APOC1-208ENST00000592535 APBB3O95704 486 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 KLKB1P03952 638 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 HMBSP08397 361 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 TGM1P22735 817 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 BRD2P25440 801 aaKnown RBP14.56□□□□□ -0.08
APOC1-208ENST00000592535 TIE1P35590 1138 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 KIR2DL1P43626 348 aaPredicted RBP14.56□□□□□ -0.08
APOC1-208ENST00000592535 ID4P47928 161 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 ZNF132P52740 706 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 MRPS21P82921 87 aaKnown RBP14.56□□□□□ -0.08
APOC1-208ENST00000592535 TPGS1Q6ZTW0 290 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 CREBRFQ8IUR6 639 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 FAM160A2Q8N612 972 aaPredicted RBP14.56□□□□□ -0.08
APOC1-208ENST00000592535 ALLCQ8N6M5 410 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 TSTD1Q8NFU3 115 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 KCTD13Q8WZ19 329 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 CDK5RAP1Q96SZ6 601 aaKnown RBP14.56□□□□□ -0.08
APOC1-208ENST00000592535 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 ZDHHC4Q9NPG8 344 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 MARK1Q9P0L2 795 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 DEC1Q9P2X7 70 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 MMP17Q9ULZ9 603 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.56□□□□□ -0.08
APOC1-208ENST00000592535 SDK1Q7Z5N4 2213 aa14.56□□□□□ -0.08
APOC1-208ENST00000592535 SPTBN4Q9H254 2564 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 M0QYV0 167 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 KLF8O95600 359 aaPredicted RBP14.55□□□□□ -0.08
APOC1-208ENST00000592535 RETP07949 1114 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 LCP1P13796 627 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 TYRP14679 529 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 HNRNPLP14866 589 aaKnown RBP eCLIP14.55□□□□□ -0.08
APOC1-208ENST00000592535 TNFRSF4P43489 277 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 RGS7P49802 495 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 COG7P83436 770 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 SPEM2Q0P670 501 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 CNGA2Q16280 664 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 CRY1Q16526 586 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 RSRC2Q7L4I2 434 aaKnown RBP14.55□□□□□ -0.08
APOC1-208ENST00000592535 IRF2BP1Q8IU81 584 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 SIX6OS1Q8N1H7 587 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 GPR161Q8N6U8 529 aaKnown RBP14.55□□□□□ -0.08
APOC1-208ENST00000592535 TERB1Q8NA31 727 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 IL17RCQ8NAC3 791 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 MLKLQ8NB16 471 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 TXNDC5Q8NBS9 432 aaKnown RBP14.55□□□□□ -0.08
APOC1-208ENST00000592535 RMDN1Q96DB5 314 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 IPO9Q96P70 1041 aaKnown RBP14.55□□□□□ -0.08
APOC1-208ENST00000592535 DNAJC17Q9NVM6 304 aaKnown RBP14.55□□□□□ -0.08
APOC1-208ENST00000592535 MARCH2Q9P0N8 246 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 USP18Q9UMW8 372 aa14.55□□□□□ -0.08
APOC1-208ENST00000592535 SLC12A8A0AV02 714 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 TBC1D3BA6NDS4 549 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 YJEFN3A6XGL0 299 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 E7ENQ6 273 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 SGK1O00141 431 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 PIK3R2O00459 728 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 CACNG3O60359 315 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 GABBR2O75899 941 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 CORO1AP31146 461 aaKnown RBP14.54□□□□□ -0.08
APOC1-208ENST00000592535 DGKEP52429 567 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 C10orf76Q5T2E6 689 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 GRAMD4Q6IC98 578 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 ANO7Q6IWH7 933 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 PMF1Q6P1K2 205 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 TMEM92Q6UXU6 159 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 KBTBD6Q86V97 674 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 SLC35F5Q8WV83 523 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 EDEM1Q92611 657 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 BHMTQ93088 406 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 P2RY11Q96G91 374 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 XPO6Q96QU8 1125 aaKnown RBP14.54□□□□□ -0.08
APOC1-208ENST00000592535 CRACR2AQ9BSW2 395 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 TPSD1Q9BZJ3 242 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 UBE2TQ9NPD8 197 aaPredicted RBP14.54□□□□□ -0.08
APOC1-208ENST00000592535 CNGB3Q9NQW8 809 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 PLK2Q9NYY3 685 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 WDR35Q9P2L0 1181 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 EBF1Q9UH73 591 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 STRIP2Q9ULQ0 834 aa14.54□□□□□ -0.08
APOC1-208ENST00000592535 THADAQ6YHU6 1953 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 ADAM23O75077 832 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 KRT5P13647 590 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 SLC9A1P19634 815 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 DAOAP59103 153 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 STILQ15468 1287 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 DPCR1Q3MIW9 517 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 HSF5Q4G112 596 aaPredicted RBP14.53□□□□□ -0.08
APOC1-208ENST00000592535 PREPLQ4J6C6 727 aaPredicted RBP14.53□□□□□ -0.08
APOC1-208ENST00000592535 EOGTQ5NDL2 527 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 BSPRYQ5W0U4 402 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 GJB7Q6PEY0 223 aa14.53□□□□□ -0.08
APOC1-208ENST00000592535 CLEC17AQ6ZS10 378 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms