RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 GTF3C4Q9UKN8 822 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 MAN2B2Q9Y2E5 1009 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 NME7Q9Y5B8 376 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 PCDHB5Q9Y5E4 795 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 PCDHGA1Q9Y5H4 931 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 SNX11Q9Y5W9 270 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 CACNA1DQ01668 2161 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 MYLKQ15746 1914 aa7.88□□□□□ -1.15
VAT1-209ENST00000592388 TRAV19A0A0A6YYK7 116 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 A0A1W2PQF6 199 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 BLACEA4D250 179 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 ENC1O14682 589 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 SCAMP3O14828 347 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 SUV39H1O43463 412 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 HUS1O60921 280 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 RFPL3O75679 317 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 NOL4O94818 638 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 CYP17A1P05093 508 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 USP17L7P0C7H9 530 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 PAX3P23760 479 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 LMO2P25791 158 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 CD6P30203 668 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 PNPLA4P41247 253 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 GRIA2P42262 883 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 TNFRSF4P43489 277 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 CSNK1EP49674 416 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 ASIC1P78348 528 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 MYL7Q01449 175 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 POU5F1Q01860 360 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 TLE1Q04724 770 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 ALCAMQ13740 583 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 SOWAHAQ2M3V2 549 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 SHC4Q6S5L8 630 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 NT5DC4Q86YG4 428 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 SCN4BQ8IWT1 228 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 DHX40Q8IX18 779 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 NELFCDQ8IXH7 590 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 CCDC65Q8IXS2 484 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 DCP1BQ8IZD4 617 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 LRRC52Q8N7C0 313 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 ARL14EPQ8N8R7 260 aaPredicted RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 LINC00301Q8NCQ3 95 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 IPO4Q8TEX9 1081 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 C2orf15Q8WU43 125 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 LEO1Q8WVC0 666 aaPredicted RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 KBTBD7Q8WVZ9 684 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 KCNE4Q8WWG9 221 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 MYLPFQ96A32 169 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 ELMO3Q96BJ8 720 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 TOE1Q96GM8 510 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 LIN37Q96GY3 246 aaPredicted RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 INTS4Q96HW7 963 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 GPR174Q9BXC1 333 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 TRIM9Q9C026 710 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 TNMDQ9H2S6 317 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 INTS13Q9NVM9 706 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 EIF2B4Q9UI10 523 aaKnown RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 ITGA11Q9UKX5 1188 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 PCDHB13Q9Y5F0 798 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 FLNCQ14315 2725 aa7.87□□□□□ -1.15
VAT1-209ENST00000592388 TP53BP1Q12888 1972 aaPredicted RBP7.87□□□□□ -1.15
VAT1-209ENST00000592388 SPTBN1Q01082 2364 aaKnown RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 A0A0A0MRY4 1105 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 C2orf78A6NCI8 922 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 TBC1D3BA6NDS4 549 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 CLIC2O15247 247 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 SPTLC2O15270 562 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 TGFB1I1O43294 461 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 LDHAP00338 332 aaKnown RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 CSH1P0DML2 217 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 CSH2P0DML3 217 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 GLDCP23378 1020 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 CCT8P50990 548 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 CYP2J2P51589 502 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 USP46P62068 366 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 RBP5P82980 135 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 SMARCB1Q12824 385 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 PKP1Q13835 747 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 DHCR24Q15392 516 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 NFE2Q16621 373 aaPredicted RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 FBXL19Q6PCT2 694 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 KIAA1324Q6UXG2 1013 aaKnown RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 TRMT11Q7Z4G4 463 aaKnown RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 FILIP1Q7Z7B0 1213 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 MIB1Q86YT6 1006 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 SPATA2LQ8IUW3 424 aaPredicted RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 GRAMD1CQ8IYS0 662 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 RDH13Q8NBN7 331 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 SNRNP27Q8WVK2 155 aaKnown RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 HPDLQ96IR7 371 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 ANKRD36BP1Q96IX9 119 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 HIC2Q96JB3 615 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 CNDP2Q96KP4 475 aaKnown RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 ZNF578Q96N58 590 aaPredicted RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 SYT15Q9BQS2 421 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 ACBD6Q9BR61 282 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 MRPL45Q9BRJ2 306 aaKnown RBP7.86□□□□□ -1.15
VAT1-209ENST00000592388 ANP32EQ9BTT0 268 aa7.86□□□□□ -1.15
VAT1-209ENST00000592388 BACH2Q9BYV9 841 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms