RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CCDC26Q8TAB7 109 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 STK32AQ8WU08 396 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 BPIFA3Q9BQP9 254 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 IER2Q9BTL4 223 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 TRIM62Q9BVG3 475 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 STK33Q9BYT3 514 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 ACP6Q9NPH0 428 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 NLRC4Q9NPP4 1024 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 ZNF510Q9Y2H8 683 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 GVINP1Q7Z2Y8 2422 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 OTOL1A6NHN0 477 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 YJEFN3A6XGL0 299 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 LGALS16A8MUM7 142 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 E7ENQ6 273 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 ATG13O75143 517 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 SERPINC1P01008 464 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 CYP17A1P05093 508 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 NCAM1P13591 858 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 CXCL12P48061 93 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 HARS2P49590 506 aaKnown RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 MTAPQ13126 283 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 MEA1Q16626 185 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 FBXO43Q4G163 708 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 TMEM196Q5HYL7 178 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 TAF3Q5VWG9 929 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 OR6B2Q6IFH4 312 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 RHBDF2Q6PJF5 856 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 CACNA2D4Q7Z3S7 1137 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 SLC47A2Q86VL8 602 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 FMNL3Q8IVF7 1028 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 FAM71AQ8IYT1 594 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 SCML4Q8N228 414 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 SYNPOQ8N3V7 929 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 NAT16Q8N8M0 369 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 IPO4Q8TEX9 1081 aaKnown RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 CHFRQ96EP1 664 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 XPO6Q96QU8 1125 aaKnown RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 CHRDQ9H2X0 955 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 PLCB1Q9NQ66 1216 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 SPHK2Q9NRA0 654 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 FAM86C1Q9NVL1 165 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 DLGAP2Q9P1A6 1054 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 WDR35Q9P2L0 1181 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 SFMBT1Q9UHJ3 866 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 AJAP1Q9UKB5 411 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-227ENST00000591849 DAAM1Q9Y4D1 1078 aa10.54□□□□□ -0.72
BRCA1-227ENST00000591849 TBC1D3BA6NDS4 549 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 LRRC10BA6NIK2 292 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 SHISA7A6NL88 538 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 GFRA3O60609 400 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 STC2O76061 302 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 GFPT2O94808 682 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 EGFP01133 1207 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 CYBBP04839 570 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 APODP05090 189 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 CORO1AP31146 461 aaKnown RBP10.53□□□□□ -0.72
BRCA1-227ENST00000591849 CLCN1P35523 988 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 CHKAP35790 457 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 STAT1P42224 750 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 KLK7P49862 253 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 CCR3P51677 355 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 NCAPHQ15003 741 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 FSTL4Q6MZW2 842 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 ZC3H14Q6PJT7 736 aaKnown RBP10.53□□□□□ -0.72
BRCA1-227ENST00000591849 DENND1CQ8IV53 801 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 SPEM1Q8N4L4 309 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 TMEM35BQ8NCS4 154 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 MSANTD4Q8NCY6 345 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 ATRIPQ8WXE1 791 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 WBP2Q969T9 261 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 PLD4Q96BZ4 506 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 PPP1R13BQ96KQ4 1090 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 PNKPQ96T60 521 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 BBS2Q9BXC9 721 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 SLC4A5Q9BY07 1137 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 LHX5Q9H2C1 402 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 FBXO4Q9UKT5 387 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 PCDHGC3Q9UN70 934 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 SLC8A2Q9UPR5 921 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 HBS1LQ9Y450 684 aaKnown RBP10.53□□□□□ -0.72
BRCA1-227ENST00000591849 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 F5P12259 2224 aa10.53□□□□□ -0.72
BRCA1-227ENST00000591849 E5RJQ4 531 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 NEDD8-MDP1E9PL57 170 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 CAVIN2O95810 425 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 SP9P0CG40 484 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 ATP1A3P13637 1013 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 CYP11B1P15538 503 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF18P17022 549 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 SOX5P35711 763 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 SLC6A11P48066 632 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 NRLP54845 237 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 SEC13P55735 322 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 ARID5AQ03989 594 aa10.52□□□□□ -0.73
BRCA1-227ENST00000591849 KDSRQ06136 332 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms