RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 VAMP7P51809 220 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 SHC2P98077 582 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 N4BP2L1Q5TBK1 243 aaPredicted RBP10.99□□□□□ -0.65
VPS4B-207ENST00000591519 RNF43Q68DV7 783 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 ANO7Q6IWH7 933 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 KLHDC10Q6PID8 442 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 TMEM25Q86YD3 366 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 BBS7Q8IWZ6 715 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 ALLCQ8N6M5 410 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 SLC2A14Q8TDB8 520 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 ELMO3Q96BJ8 720 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 THAP11Q96EK4 314 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 FAXDC2Q96IV6 333 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 KLF16Q9BXK1 252 aaPredicted RBP10.99□□□□□ -0.65
VPS4B-207ENST00000591519 TPSD1Q9BZJ3 242 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 SMOC1Q9H4F8 434 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 CYP3A43Q9HB55 503 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 POLMQ9NP87 494 aaPredicted RBP10.99□□□□□ -0.65
VPS4B-207ENST00000591519 TLR8Q9NR97 1041 aaKnown RBP10.99□□□□□ -0.65
VPS4B-207ENST00000591519 SPHK2Q9NRA0 654 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 CHMP5Q9NZZ3 219 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 DEC1Q9P2X7 70 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 SCML2Q9UQR0 700 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 INVSQ9Y283 1065 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 SH3BP1Q9Y3L3 701 aa10.99□□□□□ -0.65
VPS4B-207ENST00000591519 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 TBC1D3BA6NDS4 549 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 SCAMP3O14828 347 aaKnown RBP10.98□□□□□ -0.65
VPS4B-207ENST00000591519 KHNYNO15037 678 aaKnown RBP10.98□□□□□ -0.65
VPS4B-207ENST00000591519 KCNK5O95279 499 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 HLA-DRAP01903 254 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 CCDC130P13994 396 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 BCKDHBP21953 392 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 ATP5C1P36542 298 aaKnown RBP10.98□□□□□ -0.65
VPS4B-207ENST00000591519 MAP3K7CLP57077 242 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 BYSLQ13895 437 aaKnown RBP10.98□□□□□ -0.65
VPS4B-207ENST00000591519 MAP7D1Q3KQU3 841 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 BTBD8Q5XKL5 378 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 CEP135Q66GS9 1140 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 SPOPLQ6IQ16 392 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 SCARA5Q6ZMJ2 495 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 INTS8Q75QN2 995 aaKnown RBP10.98□□□□□ -0.65
VPS4B-207ENST00000591519 WHAMMQ8TF30 809 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 WBP2Q969T9 261 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 CYFIP2Q96F07 1278 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 KRT82Q9NSB4 513 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 HMGXB4Q9UGU5 601 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 HCN2Q9UL51 889 aa10.98□□□□□ -0.65
VPS4B-207ENST00000591519 KMT2BQ9UMN6 2715 aaPredicted RBP10.98□□□□□ -0.65
VPS4B-207ENST00000591519 A0A1W2PQ27 194 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 A0A1W2PQ64 194 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 A0A1W2PQD8 194 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 LNP1A1A4G5 178 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 CDX4O14627 284 aaPredicted RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 CACNG3O60359 315 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 ZNF202O95125 648 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 TBX18O95935 607 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 FAM200BP0CF97 657 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 TRIM21P19474 475 aaKnown RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 RPL13P26373 211 aaKnown RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 GTF2H1P32780 548 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 PLA2G4AP47712 749 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 IRX4P78413 519 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 PPP3CAQ08209 521 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 DPYDQ12882 1025 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 TCEAL6Q6IPX3 200 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 CLEC20AQ6ZU45 233 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 LPCAT2Q7L5N7 544 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 TRMT11Q7Z4G4 463 aaKnown RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 GUF1Q8N442 669 aaKnown RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 TERB1Q8NA31 727 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 TCEAL3Q969E4 200 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 CCDC47Q96A33 483 aaKnown RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 TWNKQ96RR1 684 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 EDEM2Q9BV94 578 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 UBXN6Q9BZV1 441 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 NACA2Q9H009 215 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 APOBEC3GQ9HC16 384 aaKnown RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 OSER1Q9NX31 292 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 MARK1Q9P0L2 795 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 WDR35Q9P2L0 1181 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 EVLQ9UI08 416 aaPredicted RBP10.97□□□□□ -0.65
VPS4B-207ENST00000591519 FBXO10Q9UK96 956 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 ANGPTL2Q9UKU9 493 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 PCDHA5Q9Y5H7 936 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 USP3Q9Y6I4 520 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 MYH10P35580 1976 aa10.97□□□□□ -0.65
VPS4B-207ENST00000591519 PLXND1Q9Y4D7 1925 aa10.96□□□□□ -0.65
VPS4B-207ENST00000591519 C4orf47A7E2U8 309 aa10.96□□□□□ -0.65
VPS4B-207ENST00000591519 GADD45BO75293 160 aaPredicted RBP10.96□□□□□ -0.65
VPS4B-207ENST00000591519 CILPO75339 1184 aa10.96□□□□□ -0.65
VPS4B-207ENST00000591519 CISD3P0C7P0 127 aa10.96□□□□□ -0.65
VPS4B-207ENST00000591519 NR2F2P24468 414 aa10.96□□□□□ -0.65
VPS4B-207ENST00000591519 PSMC2P35998 433 aaKnown RBP10.96□□□□□ -0.65
VPS4B-207ENST00000591519 PIK3CAP42336 1068 aa10.96□□□□□ -0.65
VPS4B-207ENST00000591519 DPP6P42658 865 aa10.96□□□□□ -0.65
VPS4B-207ENST00000591519 GCLMP48507 274 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms