RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 TMEM74BQ9NUR3 256 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 MARK1Q9P0L2 795 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 WDR35Q9P2L0 1181 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 EVLQ9UI08 416 aaPredicted RBP22.93■■□□□ 1.26
DDX39A-215ENST00000590696 DNMT3LQ9UJW3 386 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 GIPC1O14908 333 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 PLA2G4AP47712 749 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 KIF11P52732 1056 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 ENPEPQ07075 957 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 ZNF394Q53GI3 561 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 TRIM61Q5EBN2 209 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 SPDYCQ5MJ68 293 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 C10orf120Q5SQS8 335 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 PPP1R26Q5T8A7 1209 aaPredicted RBP22.92■■□□□ 1.26
DDX39A-215ENST00000590696 EGFLAMQ63HQ2 1017 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 KLHDC10Q6PID8 442 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 SYT12Q8IV01 421 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 ACOX2Q99424 681 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 DUSP16Q9BY84 665 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 DNAI2Q9GZS0 605 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 TMEM8AQ9HCN3 771 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 NAGPAQ9UK23 515 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 MYO18AQ92614 2054 aaKnown RBP22.92■■□□□ 1.26
DDX39A-215ENST00000590696 CACNA1BQ00975 2339 aa22.92■■□□□ 1.26
DDX39A-215ENST00000590696 A0A1W2PQF6 199 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 UAP1L1Q3KQV9 507 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 SH3PXD2AQ5TCZ1 1133 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 LYSMD4Q5XG99 296 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 SDE2Q6IQ49 451 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 TOGARAM2Q6ZUX3 1019 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 SCD5Q86SK9 330 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 CHPFQ8IZ52 775 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 NUSAP1Q9BXS6 441 aaKnown RBP22.91■■□□□ 1.26
DDX39A-215ENST00000590696 GOLPH3LQ9H4A5 285 aa22.91■■□□□ 1.26
DDX39A-215ENST00000590696 TNRC6BQ9UPQ9 1833 aaKnown RBP22.91■■□□□ 1.26
DDX39A-215ENST00000590696 PLXND1Q9Y4D7 1925 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 ATXN2Q99700 1313 aaKnown RBP22.9■■□□□ 1.26
DDX39A-215ENST00000590696 PRRT4C9JH25 899 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 PSEN1P49768 467 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 LMAN2Q12907 356 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 ZCWPW2Q504Y3 356 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 KRT39Q6A163 491 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 Q6ZNB5 142 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 CCDC186Q7Z3E2 898 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 BHMTQ93088 406 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 ERLEC1Q96DZ1 483 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 HEXIM2Q96MH2 286 aaKnown RBP22.9■■□□□ 1.26
DDX39A-215ENST00000590696 CALCOCO1Q9P1Z2 691 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 USP3Q9Y6I4 520 aa22.9■■□□□ 1.26
DDX39A-215ENST00000590696 CHD8Q9HCK8 2581 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 A0A1W2PQ27 194 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 A0A1W2PQ64 194 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 A0A1W2PQD8 194 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 ZBTB24O43167 697 aaPredicted RBP22.89■■□□□ 1.25
DDX39A-215ENST00000590696 AP5Z1O43299 807 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 STC2O76061 302 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 ZNF202O95125 648 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 CISD3P0C7P0 127 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 RALAP11233 206 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 ITPKAP23677 461 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 GTF2H1P32780 548 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 DPP6P42658 865 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 DGKGP49619 791 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 RPL6Q02878 288 aaKnown RBP22.89■■□□□ 1.25
DDX39A-215ENST00000590696 SLC36A4Q6YBV0 504 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 TADA2BQ86TJ2 420 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 ZNF276Q8N554 614 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 DEFB119Q8N690 84 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 IPO4Q8TEX9 1081 aaKnown RBP22.89■■□□□ 1.25
DDX39A-215ENST00000590696 SEMA4DQ92854 862 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 SCAND2PQ9GZW5 306 aaPredicted RBP22.89■■□□□ 1.25
DDX39A-215ENST00000590696 PLK2Q9NYY3 685 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 PILRBQ9UKJ0 227 aa22.89■■□□□ 1.25
DDX39A-215ENST00000590696 CSRP1P21291 193 aaKnown RBP22.88■■□□□ 1.25
DDX39A-215ENST00000590696 MCCD1P59942 119 aaPredicted RBP22.88■■□□□ 1.25
DDX39A-215ENST00000590696 ZNF252P-AS1Q0IIN9 211 aa22.88■■□□□ 1.25
DDX39A-215ENST00000590696 KIAA1211LQ6NV74 962 aa22.88■■□□□ 1.25
DDX39A-215ENST00000590696 SLC23A3Q6PIS1 610 aa22.88■■□□□ 1.25
DDX39A-215ENST00000590696 EEF2KMTQ96G04 330 aa22.88■■□□□ 1.25
DDX39A-215ENST00000590696 CD248Q9HCU0 757 aa22.88■■□□□ 1.25
DDX39A-215ENST00000590696 CLIC5Q9NZA1 410 aa22.88■■□□□ 1.25
DDX39A-215ENST00000590696 MAP1BP46821 2468 aaKnown RBP22.87■■□□□ 1.25
DDX39A-215ENST00000590696 CEACAM1P13688 526 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 ENGP17813 658 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 NDUFV2P19404 249 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 MAPK8P45983 427 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 EDRF1Q3B7T1 1238 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 PEAR1Q5VY43 1037 aaPredicted RBP22.87■■□□□ 1.25
DDX39A-215ENST00000590696 SMYD4Q8IYR2 804 aaPredicted RBP22.87■■□□□ 1.25
DDX39A-215ENST00000590696 SLC4A11Q8NBS3 891 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 FBXL13Q8NEE6 735 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 TMEM176AQ96HP8 235 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 FAXDC2Q96IV6 333 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 GABRG3Q99928 467 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 CISHQ9NSE2 258 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 RAB20Q9NX57 234 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 RASAL2Q9UJF2 1139 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 FBXO10Q9UK96 956 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 RAD54BQ9Y620 910 aa22.87■■□□□ 1.25
DDX39A-215ENST00000590696 IGHV1OR15-9A0A0B4J2B8 117 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms