RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 TRDMT1O14717 391 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 SNX2O60749 519 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 ASS1P00966 412 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 PNPLA4P41247 253 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 CACNA2D1P54289 1103 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 BST2Q10589 180 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 BIRC2Q13490 618 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 LRRN4Q8WUT4 740 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 HTR3CQ8WXA8 447 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 NAT9Q9BTE0 207 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 DDIT4Q9NX09 232 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 KCNK4Q9NYG8 393 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 LRCH1Q9Y2L9 728 aa17.67■□□□□ 0.42
SMARCA4-215ENST00000590574 UBA6A0AVT1 1052 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 ZNF286BP0CG31 522 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 JOSD2Q8TAC2 188 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 MTSS1O43312 755 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 AVILO75366 819 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 MGAT5Q09328 741 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 TMEM132BQ14DG7 1078 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 SLC1A5Q15758 541 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 DGKDQ16760 1214 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 PBXIP1Q96AQ6 731 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 NWD2Q9ULI1 1742 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 NUP98P52948 1817 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 ZNF143P52747 638 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 SLC6A3Q01959 620 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 KCNT2Q6UVM3 1135 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 SETD3Q86TU7 594 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 DEFB107AQ8IZN7 70 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.66■□□□□ 0.421e-5■■□□□ 13.3
SMARCA4-215ENST00000590574 REPS2Q8NFH8 660 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 MAGEC3Q8TD91 643 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 PRPF4O43172 522 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 FKBP6O75344 327 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 GRIK1P39086 918 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 ITGA9Q13797 1035 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 CES3Q6UWW8 571 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 FAM183BPQ6ZVS7 135 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 ASB7Q9H672 318 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 SNTG2Q9NY99 539 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 LGALS13Q9UHV8 139 aa17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 RUVBL2Q9Y230 463 aaKnown RBP17.66■□□□□ 0.42
SMARCA4-215ENST00000590574 MGRN1O60291 552 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 THRAP10827 490 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 CCDC15Q0P6D6 951 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 RIPK1Q13546 671 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 TDRD5Q8NAT2 981 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 ZNF398Q8TD17 642 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 CNBD2Q96M20 576 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 TRIM62Q9BVG3 475 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 RIPK3Q9Y572 518 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 hCG_2014768A0A024R1R8 64 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 YDJCA8MPS7 323 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 MAFO75444 373 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 CYP1A1P04798 512 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 SERPINE1P05121 402 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 PHEXP78562 749 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 PTP4A2Q12974 167 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 C16orf46Q6P387 395 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 SOX13Q9UN79 622 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 C2CD2LO14523 706 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 ABHD15Q6UXT9 468 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 CYP4X1Q8N118 509 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 AFG1LQ8WV93 481 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.65■□□□□ 0.421e-7■■■■■ 40.8
SMARCA4-215ENST00000590574 KLHL4Q9C0H6 718 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 APOA4P06727 396 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 TBL3Q12788 808 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 ADGRF2Q8IZF7 708 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 RFWD2Q8NHY2 731 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 ORC6Q9Y5N6 252 aa17.65■□□□□ 0.42
SMARCA4-215ENST00000590574 TCRBV9S1A1TA0A576 114 aa17.64■□□□□ 0.42
SMARCA4-215ENST00000590574 TIMM44O43615 452 aa17.64■□□□□ 0.42
SMARCA4-215ENST00000590574 LAYNQ6UX15 382 aa17.64■□□□□ 0.42
SMARCA4-215ENST00000590574 GPRC5AQ8NFJ5 357 aa17.64■□□□□ 0.42
SMARCA4-215ENST00000590574 WDCPQ9H6R7 721 aa17.64■□□□□ 0.42
SMARCA4-215ENST00000590574 SARS2Q9NP81 518 aaKnown RBP17.64■□□□□ 0.42
SMARCA4-215ENST00000590574 AKAP10O43572 662 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 SEC24DO94855 1032 aaPredicted RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 UNGP13051 313 aaPredicted RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 PGAM1P18669 254 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 PDAP1Q13442 181 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 SNAPC2Q13487 334 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 FNBP1LQ5T0N5 605 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 FRA10AC1Q70Z53 315 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 PDCD6IPQ8WUM4 868 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 MRPL46Q9H2W6 279 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 FBXO6Q9NRD1 293 aaPredicted RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 ARHGAP28Q9P2N2 729 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 MYH3P11055 1940 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 ANGPT2O15123 496 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 H2AFYO75367 372 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 KRT36O76013 467 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 GPR162Q16538 588 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 VSTM1Q6UX27 236 aa17.64■□□□□ 0.41
SMARCA4-215ENST00000590574 LRMDAQ9H2I8 198 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms