RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 PDCLQ13371 301 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 ASIC2Q16515 512 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 FAM78AQ5JUQ0 283 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 BHLHA9Q7RTU4 235 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 SCD5Q86SK9 330 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 SLC22A12Q96S37 553 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 SYT11Q9BT88 431 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 SLC4A5Q9BY07 1137 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 FBXO44Q9H4M3 255 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 NMUR1Q9HB89 426 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 LRRC4Q9HBW1 653 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 ST7Q9NRC1 585 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.55■■□□□ 1.25e-7■■■■□ 19.7
R3HDM4-206ENST00000590454 ACACBO00763 2458 aa22.55■■□□□ 1.2
R3HDM4-206ENST00000590454 ABL1P00519 1130 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 ZDHHC11BP0C7U3 371 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 PSMC3P17980 439 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 CXCL12P48061 93 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 RPL34P49207 117 aaKnown RBP22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 ZBED6P86452 979 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 TBX2Q13207 712 aaPredicted RBP22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 SIM2Q14190 667 aaPredicted RBP22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 CSRP2Q16527 193 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 MAB21L3Q8N8X9 362 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 ASB16Q96NS5 453 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 SLITRK1Q96PX8 696 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 GCNAQ96QF7 691 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 CPXM1Q96SM3 734 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 CYP2S1Q96SQ9 504 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 AGPAT1Q99943 283 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 SMG9Q9H0W8 520 aaKnown RBP22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 PDCL3Q9H2J4 239 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 SLITRK6Q9H5Y7 841 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 TRPC7Q9HCX4 862 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 EHD2Q9NZN4 543 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 TRPM5Q9NZQ8 1165 aa22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 LUC7L2Q9Y383 392 aaKnown RBP22.54■■□□□ 1.2
R3HDM4-206ENST00000590454 A0A1W2PQH9 124 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 E5RJQ4 531 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 ZBED1O96006 694 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 GDI1P31150 447 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 PM20D1Q6GTS8 502 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 PRR23CQ6ZRP0 262 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 CCDC186Q7Z3E2 898 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 ZNF677Q86XU0 584 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 STK32AQ8WU08 396 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 CPA5Q8WXQ8 436 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 MRPS31Q92665 395 aaKnown RBP22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 MRFAP1L1Q96HT8 127 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 HSFY1Q96LI6 401 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 MIS12Q9H081 205 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 HAUS4Q9H6D7 363 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 TASP1Q9H6P5 420 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 PIAS3Q9Y6X2 628 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 NCANO14594 1321 aa22.53■■□□□ 1.2
R3HDM4-206ENST00000590454 SPTBN2O15020 2390 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 FOXD2O60548 495 aaPredicted RBP22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 CDH5P33151 784 aaPredicted RBP22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 CNR2P34972 360 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 ADKP55263 362 aaKnown RBP22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 NOMO3P69849 1222 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 PTPN20Q4JDL3 420 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 ARHGAP15Q53QZ3 475 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 NAA35Q5VZE5 725 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 HGSNATQ68CP4 663 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 ZNF571Q7Z3V5 609 aaPredicted RBP22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 SCUBE3Q8IX30 993 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 SIX6OS1Q8N1H7 587 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 ZSCAN18Q8TBC5 510 aaPredicted RBP22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 DEPDC1BQ8WUY9 529 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 SMARCD2Q92925 531 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 RSPRY1Q96DX4 576 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 IQCDQ96DY2 449 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 PPP1R13BQ96KQ4 1090 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 RNF38Q9H0F5 515 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 CCSER2Q9H7U1 834 aa22.52■■□□□ 1.2
R3HDM4-206ENST00000590454 YJEFN3A6XGL0 299 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 E7ENQ6 273 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 PAPSS1O43252 624 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 PRAMEF12O95522 483 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 ADCY5O95622 1261 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 ERBB2P04626 1255 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 CYP1A1P04798 512 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 PLEKP08567 350 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 CHRNB1P11230 501 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 PRKCIP41743 596 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 DAOAP59103 153 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 SATB1Q01826 763 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 C2CD6Q53TS8 623 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 SNX30Q5VWJ9 437 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 VITQ6UXI7 678 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 TMEM110Q86TL2 294 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 MON1AQ86VX9 555 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 ARL14EPQ8N8R7 260 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 TMEM35BQ8NCS4 154 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 PDZD8Q8NEN9 1154 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 ZNF397Q8NF99 534 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 OVCA2Q8WZ82 227 aa22.51■■□□□ 1.19
R3HDM4-206ENST00000590454 PIWIL1Q96J94 861 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms