RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 MXRA7P84157 204 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 MBTD1Q05BQ5 628 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 NAB1Q13506 487 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 KRT81Q14533 505 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 TMCO4Q5TGY1 634 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 EEF1DP3Q658K8 133 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 STEAP4Q687X5 459 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 TMEM154Q6P9G4 183 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 LBX2Q6XYB7 198 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 UNC5AQ6ZN44 842 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 ALYREFQ86V81 257 aaKnown RBP12.84□□□□□ -0.35
PDE4A-207ENST00000590407 TREML1Q86YW5 311 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
PDE4A-207ENST00000590407 SCUBE1Q8IWY4 988 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 CTAGE3PQ8IX95 158 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 TAB3Q8N5C8 712 aaPredicted RBP12.84□□□□□ -0.35
PDE4A-207ENST00000590407 GATA6Q92908 595 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 SIGLEC10Q96LC7 697 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 ZNF184Q99676 751 aaPredicted RBP12.84□□□□□ -0.35
PDE4A-207ENST00000590407 EBNA1BP2Q99848 306 aaKnown RBP12.84□□□□□ -0.35
PDE4A-207ENST00000590407 FAM96AQ9H5X1 160 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 SLC24A3Q9HC58 644 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 THAP1Q9NVV9 213 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 SCOCQ9UIL1 159 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 PCDHA11Q9Y5I1 949 aa12.84□□□□□ -0.35
PDE4A-207ENST00000590407 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 FKBP6O75344 327 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 AVILO75366 819 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 NFICP08651 508 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 CXCL8P10145 99 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 MLNP12872 115 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 ZFXP17010 805 aaPredicted RBP12.83□□□□□ -0.36
PDE4A-207ENST00000590407 RBL1P28749 1068 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 NR2C2P49116 596 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 NRLP54845 237 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 CDH8P55286 799 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 THOC5Q13769 683 aaKnown RBP12.83□□□□□ -0.36
PDE4A-207ENST00000590407 CHI3L2Q15782 390 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 AAGABQ6PD74 315 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 APOBEC3FQ8IUX4 373 aaKnown RBP12.83□□□□□ -0.36
PDE4A-207ENST00000590407 RBM15BQ8NDT2 890 aaKnown RBP12.83□□□□□ -0.36
PDE4A-207ENST00000590407 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 GPR20Q99678 358 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 PRDM16Q9HAZ2 1276 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 SMYD2Q9NRG4 433 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 PRMT7Q9NVM4 692 aaPredicted RBP12.83□□□□□ -0.36
PDE4A-207ENST00000590407 MOCS1Q9NZB8 636 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 PPARGC1AQ9UBK2 798 aaKnown RBP12.83□□□□□ -0.36
PDE4A-207ENST00000590407 HMGXB4Q9UGU5 601 aa12.83□□□□□ -0.36
PDE4A-207ENST00000590407 LACTBL1A8MY62 500 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 ALDH1A2O94788 518 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 PDHA1P08559 390 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 KRT19P08727 400 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 MYL4P12829 197 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 DESP17661 470 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 HIRAP54198 1017 aaPredicted RBP12.82□□□□□ -0.36
PDE4A-207ENST00000590407 RCN2Q14257 317 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 CCDC14Q49A88 953 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 CES4AQ5XG92 561 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 NAIF1Q69YI7 327 aaPredicted RBP12.82□□□□□ -0.36
PDE4A-207ENST00000590407 C1orf228Q6PIY5 440 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 FAM183BPQ6ZVS7 135 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 ZNF534Q76KX8 674 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 MARK2Q7KZI7 788 aaKnown RBP12.82□□□□□ -0.36
PDE4A-207ENST00000590407 NT5DC4Q86YG4 428 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 ZDHHC17Q8IUH5 632 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 ARID3BQ8IVW6 561 aaPredicted RBP12.82□□□□□ -0.36
PDE4A-207ENST00000590407 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 STKLD1Q8NE28 680 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 ACAP3Q96P50 834 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 FAM192AQ9GZU8 254 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 ARMCX1Q9P291 453 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 PDP2Q9P2J9 529 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 ITGA11Q9UKX5 1188 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 MGAMO43451 1857 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
PDE4A-207ENST00000590407 HMX2A2RU54 273 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 SDR42E2A6NKP2 422 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 CAPN15O75808 1086 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 ITGB3P05106 788 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 CSH1P0DML2 217 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 CSH2P0DML3 217 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 ANPEPP15144 967 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 CYP3A5P20815 502 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 SCNN1AP37088 669 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 TUBP50607 506 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 SNX16P57768 344 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 SESN3P58005 492 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 AP2B1P63010 937 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 STX3Q13277 289 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 MTM1Q13496 603 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 SEMA5AQ13591 1074 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 PKDCCQ504Y2 493 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 OLFML1Q6UWY5 402 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 ULK2Q8IYT8 1036 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 CEP120Q8N960 986 aa12.81□□□□□ -0.36
PDE4A-207ENST00000590407 HEXIM2Q96MH2 286 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms