RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 MYADMQ96S97 322 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 DDX23Q9BUQ8 820 aaKnown RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 SELENOOQ9BVL4 669 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 SMOC2Q9H3U7 446 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 TRPV4Q9HBA0 871 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 MRPL47Q9HD33 250 aaKnown RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 LUC7LQ9NQ29 371 aaKnown RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 METTL5Q9NRN9 209 aaKnown RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 RRN3Q9NYV6 651 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.61□□□□□ -0.39
APOC1-206ENST00000590334 EPS15L1Q9UBC2 864 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 NAALADL1Q9UQQ1 740 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 TMEM191CA6NGB0 347 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 C2CD4BA6NLJ0 364 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 GRAP2O75791 330 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 IPO7O95373 1038 aaKnown RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 TBX18O95935 607 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 LAMP2P13473 410 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 TCF3P15923 654 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 HDCP19113 662 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 RFC1P35251 1148 aaPredicted RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 FLT3P36888 993 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 KRT83P78385 493 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 NNTQ13423 1086 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 EIF4EBP2Q13542 120 aaPredicted RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 BNIPLQ7Z465 357 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 PHLDB2Q86SQ0 1253 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 ARL14EPQ8N8R7 260 aaPredicted RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 JOSD2Q8TAC2 188 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 RNF139Q8WU17 664 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 ATXN2LQ8WWM7 1075 aaKnown RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 ARHGEF26Q96DR7 871 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 PGAP3Q96FM1 320 aaPredicted RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
APOC1-206ENST00000590334 ASB16Q96NS5 453 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 CYP2S1Q96SQ9 504 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 NPY6RQ99463 290 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 KCNF1Q9H3M0 494 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 TRPC7Q9HCX4 862 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 TMEM51Q9NW97 253 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 UVRAGQ9P2Y5 699 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 MYO1AQ9UBC5 1043 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 DNMT3LQ9UJW3 386 aa12.6□□□□□ -0.39
APOC1-206ENST00000590334 A0A0A6YYK5 440 aaPredicted RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 BTNL10A8MVZ5 291 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 DPYSL4O14531 572 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 CAPN9O14815 690 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 PJA2O43164 708 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 MTA2O94776 668 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 ENDOD1O94919 500 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 GJB6O95452 261 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 CKMP06732 381 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 FCARP24071 287 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 AVPR1AP37288 418 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 PTPN9P43378 593 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 VAV2P52735 878 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 HADHBP55084 474 aaKnown RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 RNASE9P60153 205 aaKnown RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 RPL7AP62424 266 aaKnown RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 SLC25A52Q3SY17 297 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 C10orf120Q5SQS8 335 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 RHOT2Q8IXI1 618 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 EMC1Q8N766 993 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 ACRBPQ8NEB7 543 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 ZSCAN18Q8TBC5 510 aaPredicted RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 DQX1Q8TE96 717 aaKnown RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 FNIP1Q8TF40 1166 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 SMARCD2Q92925 531 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 ACSF2Q96CM8 615 aaPredicted RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 MCEEQ96PE7 176 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 KLF16Q9BXK1 252 aaPredicted RBP12.59□□□□□ -0.39
APOC1-206ENST00000590334 SLITRK6Q9H5Y7 841 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 KIF9Q9HAQ2 790 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 TDP1Q9NUW8 608 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 MARCH2Q9P0N8 246 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 PRKAG3Q9UGI9 489 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 NUDT5Q9UKK9 219 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 ARHGAP26Q9UNA1 814 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 NR2E1Q9Y466 385 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
APOC1-206ENST00000590334 PRAMEF12O95522 483 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 IGLV3-27P01718 113 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 PDGFRAP16234 1089 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 GPD1P21695 349 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 GBP2P32456 591 aaPredicted RBP12.58□□□□□ -0.4
APOC1-206ENST00000590334 KPNA1P52294 538 aaPredicted RBP12.58□□□□□ -0.4
APOC1-206ENST00000590334 ZNF143P52747 638 aaPredicted RBP12.58□□□□□ -0.4
APOC1-206ENST00000590334 ZXDBP98169 803 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 RING1Q06587 406 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 EFEMP1Q12805 493 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 CCDC14Q49A88 953 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 FAM78AQ5JUQ0 283 aa12.58□□□□□ -0.4
APOC1-206ENST00000590334 OTUD1Q5VV17 481 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms