RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 LRRC4Q9HBW1 653 aa22.4■■□□□ 1.18
LRP3-202ENST00000590275 APEX2Q9UBZ4 518 aa22.4■■□□□ 1.18
LRP3-202ENST00000590275 ADH1CP00326 375 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 RALAP11233 206 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 HNRNPLP14866 589 aaKnown RBP eCLIP22.39■■□□□ 1.17
LRP3-202ENST00000590275 RPL34P49207 117 aaKnown RBP22.39■■□□□ 1.17
LRP3-202ENST00000590275 BSPRYQ5W0U4 402 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 ZC3H14Q6PJT7 736 aaKnown RBP22.39■■□□□ 1.17
LRP3-202ENST00000590275 ATRIPQ8WXE1 791 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 SHC3Q92529 594 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 NDST4Q9H3R1 872 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 TJP2Q9UDY2 1190 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 NFE2L3Q9Y4A8 694 aa22.39■■□□□ 1.17
LRP3-202ENST00000590275 A0A0A0MRY4 1105 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 KCNJ18B7U540 433 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 TULP3O75386 442 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 LETM1O95202 739 aaPredicted RBP22.38■■□□□ 1.17
LRP3-202ENST00000590275 FYNP06241 537 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 SLC8A3P57103 927 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 GAD2Q05329 585 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 KCNJ12Q14500 433 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 TPGS1Q6ZTW0 290 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 SCML4Q8N228 414 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 WDTC1Q8N5D0 677 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 ZNF606Q8WXB4 792 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 HHIPQ96QV1 700 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 PNKPQ96T60 521 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 FAM126AQ9BYI3 521 aaPredicted RBP22.38■■□□□ 1.17
LRP3-202ENST00000590275 EPC1Q9H2F5 836 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 SEMA4AQ9H3S1 761 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 MARCH2Q9P0N8 246 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 SFMBT1Q9UHJ3 866 aa22.38■■□□□ 1.17
LRP3-202ENST00000590275 SLC12A8A0AV02 714 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 KAT7O95251 611 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 PRKCSHP14314 528 aaPredicted RBP22.37■■□□□ 1.17
LRP3-202ENST00000590275 EIF2DP41214 584 aaKnown RBP22.37■■□□□ 1.17
LRP3-202ENST00000590275 KIR2DL1P43626 348 aaPredicted RBP22.37■■□□□ 1.17
LRP3-202ENST00000590275 MFAP3P55082 362 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 ANO4Q32M45 955 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 FBXO43Q4G163 708 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 C2orf27AQ580R0 203 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 TCP11X2Q5H9J9 407 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 CDKAL1Q5VV42 579 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 ARHGAP18Q8N392 663 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 ENOX1Q8TC92 643 aaKnown RBP22.37■■□□□ 1.17
LRP3-202ENST00000590275 BHMTQ93088 406 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 CNGB3Q9NQW8 809 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 TAB2Q9NYJ8 693 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 TMEM63CQ9P1W3 806 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 DACH1Q9UI36 760 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 DNAJC12Q9UKB3 198 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 AGO1Q9UL18 857 aaKnown RBP22.37■■□□□ 1.17
LRP3-202ENST00000590275 MYOFQ9NZM1 2061 aa22.37■■□□□ 1.17
LRP3-202ENST00000590275 FOXN3O00409 490 aaPredicted RBP22.36■■□□□ 1.17
LRP3-202ENST00000590275 MSI1O43347 362 aaKnown RBP22.36■■□□□ 1.17
LRP3-202ENST00000590275 CORO1AP31146 461 aaKnown RBP22.36■■□□□ 1.17
LRP3-202ENST00000590275 HOXA6P31267 233 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 STILQ15468 1287 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 LPAL2Q16609 132 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 BTBD8Q5XKL5 378 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 TOGARAM2Q6ZUX3 1019 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 FMNL3Q8IVF7 1028 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 SIX6OS1Q8N1H7 587 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 CCDC33Q8N5R6 958 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 MIS12Q9H081 205 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 ARHGEF4Q9NR80 690 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 PLK2Q9NYY3 685 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 MARK1Q9P0L2 795 aa22.36■■□□□ 1.17
LRP3-202ENST00000590275 RIF1Q5UIP0 2472 aaKnown RBP22.36■■□□□ 1.17
LRP3-202ENST00000590275 ATG2BQ96BY7 2078 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 NEDD8-MDP1E9PL57 170 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 THAP12O43422 761 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 TYRP14679 529 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 GNA15P30679 374 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 CLCN1P35523 988 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 DMC1Q14565 340 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 TRIP4Q15650 581 aaPredicted RBP22.35■■□□□ 1.17
LRP3-202ENST00000590275 CT47A1Q5JQC4 288 aaPredicted RBP22.35■■□□□ 1.17
LRP3-202ENST00000590275 RSRC2Q7L4I2 434 aaKnown RBP22.35■■□□□ 1.17
LRP3-202ENST00000590275 ENOSF1Q7L5Y1 443 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 SYT13Q7L8C5 426 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 WDR5BQ86VZ2 330 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 LONP2Q86WA8 852 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 DENND1CQ8IV53 801 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 FAM114A1Q8IWE2 563 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 SCUBE3Q8IX30 993 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 PIWIL1Q96J94 861 aaKnown RBP22.35■■□□□ 1.17
LRP3-202ENST00000590275 HSFY1Q96LI6 401 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 SLC4A5Q9BY07 1137 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 HSD3B7Q9H2F3 369 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 LSM7Q9UK45 103 aaKnown RBP22.35■■□□□ 1.17
LRP3-202ENST00000590275 CLEC4EQ9ULY5 219 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 SMG5Q9UPR3 1016 aaKnown RBP22.35■■□□□ 1.17
LRP3-202ENST00000590275 FHOD1Q9Y613 1164 aa22.35■■□□□ 1.17
LRP3-202ENST00000590275 KIAA1549LQ6ZVL6 1849 aa22.34■■□□□ 1.17
LRP3-202ENST00000590275 OTOGLQ3ZCN5 2332 aa22.34■■□□□ 1.17
LRP3-202ENST00000590275 CACNG3O60359 315 aa22.34■■□□□ 1.17
LRP3-202ENST00000590275 ADAM23O75077 832 aa22.34■■□□□ 1.17
LRP3-202ENST00000590275 CISD3P0C7P0 127 aa22.34■■□□□ 1.17
LRP3-202ENST00000590275 USP8P40818 1118 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms