RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ETFBKMTQ8IXQ9 262 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 FAM71AQ8IYT1 594 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 SPEM1Q8N4L4 309 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 EDEM1Q92611 657 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 LSM14BQ9BX40 385 aaKnown RBP19.11■□□□□ 0.65
DDX39A-212ENST00000590260 SLC4A5Q9BY07 1137 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 NACA2Q9H009 215 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 IRF2BPLQ9H1B7 796 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 CNGB3Q9NQW8 809 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 TBC1D14Q9P2M4 693 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 RASAL2Q9UJF2 1139 aa19.11■□□□□ 0.65
DDX39A-212ENST00000590260 K7EQS6 105 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 THAP12O43422 761 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 RNF40O75150 1001 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 RALAP11233 206 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 USP8P40818 1118 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 MRE11P49959 708 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 COPB1P53618 953 aaKnown RBP19.1■□□□□ 0.65
DDX39A-212ENST00000590260 DMWDQ09019 674 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 MEA1Q16626 185 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 ANO6Q4KMQ2 910 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 SLC47A2Q86VL8 602 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 ARHGAP18Q8N392 663 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 OTUB2Q96DC9 234 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 HSFY1Q96LI6 401 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 FAM81BQ96LP2 452 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 IER2Q9BTL4 223 aa19.1■□□□□ 0.65
DDX39A-212ENST00000590260 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
DDX39A-212ENST00000590260 TRIM24O15164 1050 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 ADH5P11766 374 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 DRD1P21728 446 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 GRSF1Q12849 480 aaKnown RBP eCLIP19.09■□□□□ 0.65
DDX39A-212ENST00000590260 NR1H3Q13133 447 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 DRAP1Q14919 205 aaPredicted RBP19.09■□□□□ 0.65
DDX39A-212ENST00000590260 ZNF528Q3MIS6 628 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 BTBD8Q5XKL5 378 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 ASCL5Q7RTU5 278 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 SIX6OS1Q8N1H7 587 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 SYNPOQ8N3V7 929 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 AOPEPQ8N6M6 819 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 PIWIL1Q96J94 861 aaKnown RBP19.09■□□□□ 0.65
DDX39A-212ENST00000590260 SPHK2Q9NRA0 654 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 MARCH2Q9P0N8 246 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 SFMBT1Q9UHJ3 866 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 PCDHGC3Q9UN70 934 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 SIK3Q9Y2K2 1263 aa19.09■□□□□ 0.65
DDX39A-212ENST00000590260 HOXC11O43248 304 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-212ENST00000590260 PAPSS1O43252 624 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-212ENST00000590260 PAPSS2O95340 614 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-212ENST00000590260 HMBSP08397 361 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 ATP1A3P13637 1013 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 UCHL3P15374 230 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 MSANTD2Q6P1R3 559 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 TMEM110Q86TL2 294 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 DHX40Q8IX18 779 aaKnown RBP19.08■□□□□ 0.64
DDX39A-212ENST00000590260 SCUBE3Q8IX30 993 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 ZBTB44Q8NCP5 570 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 IRGQQ8WZA9 623 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 MIS12Q9H081 205 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 PLCB1Q9NQ66 1216 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 HCN2Q9UL51 889 aa19.08■□□□□ 0.64
DDX39A-212ENST00000590260 ATG2BQ96BY7 2078 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 SLC12A8A0AV02 714 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 LRRC10BA6NIK2 292 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 CHURC1-FNTBB4DL54 471 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 E5RJQ4 531 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 PES1O00541 588 aaKnown RBP19.07■□□□□ 0.64
DDX39A-212ENST00000590260 MSI1O43347 362 aaKnown RBP19.07■□□□□ 0.64
DDX39A-212ENST00000590260 ADH1CP00326 375 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 CORO1AP31146 461 aaKnown RBP19.07■□□□□ 0.64
DDX39A-212ENST00000590260 CXCL12P48061 93 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 AMPD2Q01433 879 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 PDCLQ13371 301 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 TRIP4Q15650 581 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-212ENST00000590260 KLHL40Q2TBA0 621 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 SMYD5Q6GMV2 418 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 PASD1Q8IV76 773 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 FMNL3Q8IVF7 1028 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 NAT16Q8N8M0 369 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 STK32AQ8WU08 396 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 DDX1Q92499 740 aaKnown RBP19.07■□□□□ 0.64
DDX39A-212ENST00000590260 CPXM1Q96SM3 734 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 CDK5RAP1Q96SZ6 601 aaKnown RBP19.07■□□□□ 0.64
DDX39A-212ENST00000590260 ABCC13Q9NSE7 274 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 MARK1Q9P0L2 795 aa19.07■□□□□ 0.64
DDX39A-212ENST00000590260 AGO1Q9UL18 857 aaKnown RBP19.07■□□□□ 0.64
DDX39A-212ENST00000590260 A0A0A0MRY4 1105 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 PRR23AA6NEV1 266 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 GFRA2O00451 464 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 MED7O43513 233 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 LILRB5O75023 590 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 TULP3O75386 442 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 LTFP02788 710 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 EIF2DP41214 584 aaKnown RBP19.06■□□□□ 0.64
DDX39A-212ENST00000590260 CCR3P51677 355 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 COG7P83436 770 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 GAD2Q05329 585 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 KDSRQ06136 332 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 TAF5Q15542 800 aa19.06■□□□□ 0.64
DDX39A-212ENST00000590260 TPGS1Q6ZTW0 290 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms