RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SELENOOQ9BVL4 669 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SDCBP2Q9H190 292 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 PLEKHA4Q9H4M7 779 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 RXFP1Q9HBX9 757 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 ST7Q9NRC1 585 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 DONSONQ9NYP3 566 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 UXTQ9UBK9 157 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 CNOT8Q9UFF9 292 aaKnown RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 AJAP1Q9UKB5 411 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 ZMIZ1Q9ULJ6 1067 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 NENFQ9UMX5 172 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 STARD13Q9Y3M8 1113 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 NCANO14594 1321 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 BRCA2P51587 3418 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 MYH10P35580 1976 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 TBC1D4O60343 1298 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 PLEKP08567 350 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 CSH1P0DML2 217 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 CSH2P0DML3 217 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 ATF2P15336 505 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 PRLRP16471 622 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 PFKLP17858 780 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 LMO2P25791 158 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 TKTP29401 623 aaKnown RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 CASQ1P31415 396 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GBP1P32455 592 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GRIK1P39086 918 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 BRCC3P46736 316 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF135P52742 658 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 EPHB3P54753 998 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 AIF1P55008 147 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 ERVK-21P61565 698 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GNG11P61952 73 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 SMAD3P84022 425 aaKnown RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GOLGA8FQ08AF8 430 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GOLGA8DPQ0D2H9 430 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 HIF1AQ16665 826 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 HADHQ16836 314 aaKnown RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GLIPR1L2Q4G1C9 344 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 SLC39A12Q504Y0 691 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 LRRC38Q5VT99 294 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 KIAA0319Q5VV43 1072 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 PLEKHA7Q6IQ23 1121 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 C11orf63Q6NUN7 778 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 FAM117BQ6P1L5 589 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 CD300LGQ6UXG3 332 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 SND1Q7KZF4 910 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 MON1BQ7L1V2 547 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 FAM35AQ86V20 835 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 MON1AQ86VX9 555 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 FUKQ8N0W3 1084 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GPATCH11Q8N954 259 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 STKLD1Q8NE28 680 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 LNX1Q8TBB1 728 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 SLC35G2Q8TBE7 412 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 FEZF2Q8TBJ5 459 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 CPA5Q8WXQ8 436 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 TFAP2BQ92481 460 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 PCED1BQ96HM7 432 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GDF15Q99988 308 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 PAAF1Q9BRP4 392 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 B3GNT5Q9BYG0 378 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GPR62Q9BZJ7 368 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 CXCL16Q9H2A7 254 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 SLC28A3Q9HAS3 691 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 LZTFL1Q9NQ48 299 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 TLR9Q9NR96 1032 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 KRT82Q9NSB4 513 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 OLA1Q9NTK5 396 aaKnown RBP7.68□□□□□ -1.18
SMAD4-210ENST00000590061 MARCH5Q9NX47 278 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 LMCD1Q9NZU5 365 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 STAP1Q9ULZ2 295 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 GUCA1BQ9UMX6 200 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 PCDHGC5Q9Y5F6 944 aa7.68□□□□□ -1.18
SMAD4-210ENST00000590061 MYO9BQ13459 2157 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MKI67P46013 3256 aaKnown RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 CCDC66A2RUB6 948 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MYBPHLA2RUH7 354 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TMCO5BA8MYB1 307 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 CES2O00748 559 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 PRRG1O14668 218 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MSTNO14793 375 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ABLIM3O94929 683 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 CXCL14O95715 111 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ZBED1O96006 694 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 KRT7P08729 469 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 POU2F2P09086 479 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 PNMA6AP0CW24 399 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 SLC2A3P11169 496 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 RALAP11233 206 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 TCP1P17987 556 aaKnown RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ABCB4P21439 1286 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 ADORA2BP29275 332 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 SDC4P31431 198 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 YWHAZP63104 245 aaKnown RBP7.67□□□□□ -1.18
SMAD4-210ENST00000590061 SLC6A3Q01959 620 aa7.67□□□□□ -1.18
SMAD4-210ENST00000590061 MAMLD1Q13495 774 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms