RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
PRKCSH-210ENST00000589990 METTL12A8MUP2 240 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 CBX4O00257 560 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 MDM4O15151 490 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 FLRT2O43155 660 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 LDHAP00338 332 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 EIF2S3P41091 472 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 IL12RB1P42701 662 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 DGKGP49619 791 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 IL9RQ01113 521 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 SNX30Q5VWJ9 437 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 PCSK4Q6UW60 755 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 NUDT18Q6ZVK8 323 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 HTR3DQ70Z44 454 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 FAM124AQ86V42 546 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 GPD1LQ8N335 351 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 PDCD7Q8N8D1 485 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 B3GALNT2Q8NCR0 500 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 CDC6Q99741 560 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 DUSP9Q99956 384 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 KLF16Q9BXK1 252 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 OSER1Q9NX31 292 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 IL37Q9NZH6 218 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 EXOC7Q9UPT5 735 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 KNTC1P50748 2209 aa13.52□□□□□ -0.25
PRKCSH-210ENST00000589990 TACC1O75410 805 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 BEST1O76090 585 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 RTN3O95197 1032 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 TNNC2P02585 160 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 COPAP53621 1224 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 CDH8P55286 799 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 GEN1Q17RS7 908 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 DUOXA2Q1HG44 320 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 PREPLQ4J6C6 727 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 METTL3Q86U44 580 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 FAM35AQ86V20 835 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 TMPRSS6Q8IU80 811 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 GALNT15Q8N3T1 639 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 ZMIZ2Q8NF64 920 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 CADM4Q8NFZ8 388 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 OVCA2Q8WZ82 227 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 SNX19Q92543 992 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 XPO6Q96QU8 1125 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 C6orf106Q9H6K1 298 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 UPF2Q9HAU5 1272 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 MARK1Q9P0L2 795 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 NUDT5Q9UKK9 219 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 NFE2L3Q9Y4A8 694 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 PCDHGB2Q9Y5G2 931 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 CKAP5Q14008 2032 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 MYH10P35580 1976 aa13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 TP53BP1Q12888 1972 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-210ENST00000589990 FAM92AA1XBS5 289 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 A8MXQ7 604 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 PYCARD-AS1I3L0S3 204 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 GFRA2O00451 464 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 TNFSF14O43557 240 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 TLR5O60602 858 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 PRKCHP24723 683 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 HOXD13P35453 343 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 LONP1P36776 959 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 TUBP50607 506 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 ORC1Q13415 861 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 WDR72Q3MJ13 1102 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 ZNF605Q86T29 641 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 SORCS1Q8WY21 1168 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 NACA2Q9H009 215 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 SMYD3Q9H7B4 428 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 CLEC4EQ9ULY5 219 aa13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 R3HCC1Q9Y3T6 440 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-210ENST00000589990 H0Y8X5 98 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 TK2O00142 265 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 DLATP10515 647 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 IDEP14735 1019 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 GAP43P17677 238 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 ACSL1P33121 698 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 MFAP3P55082 362 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 MYL6P60660 151 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 SEMG2Q02383 582 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 ENPP2Q13822 863 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 STARD3Q14849 445 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 PRAMEF14Q5SWL7 426 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 IL27RAQ6UWB1 636 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 FUKQ8N0W3 1084 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 RDH13Q8NBN7 331 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 SIPA1Q96FS4 1042 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 FCRL3Q96P31 734 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 SMOQ99835 787 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 MED10Q9BTT4 135 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 BACH2Q9BYV9 841 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms