RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 FILIP1LQ4L180 1135 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 TMEM196Q5HYL7 178 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 MIB1Q86YT6 1006 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 CD101Q93033 1021 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 FAM122AQ96E09 287 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 ERGIC2Q96RQ1 377 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 SLC4A5Q9BY07 1137 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 HSD3B7Q9H2F3 369 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 NUDT5Q9UKK9 219 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 FBXO4Q9UKT5 387 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 SIK3Q9Y2K2 1263 aa17.2■□□□□ 0.34
DNMT1-221ENST00000589538 YJEFN3A6XGL0 299 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 E7ENQ6 273 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 MDM4O15151 490 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 STC2O76061 302 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 ADH5P11766 374 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 EIF2DP41214 584 aaKnown RBP17.19■□□□□ 0.34
DNMT1-221ENST00000589538 GAD2Q05329 585 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 CCINQ13939 588 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 MSANTD2Q6P1R3 559 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 BEND5Q7L4P6 421 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 TMEM110Q86TL2 294 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 SLC47A2Q86VL8 602 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 BBS7Q8IWZ6 715 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
DNMT1-221ENST00000589538 ATOH1Q92858 354 aaPredicted RBP17.19■□□□□ 0.34
DNMT1-221ENST00000589538 PLD4Q96BZ4 506 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 PCMTD1Q96MG8 357 aaPredicted RBP17.19■□□□□ 0.34
DNMT1-221ENST00000589538 GANQ9H2C0 597 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 ACP6Q9NPH0 428 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 SPHK2Q9NRA0 654 aa17.19■□□□□ 0.34
DNMT1-221ENST00000589538 FAM207AQ9NSI2 230 aaPredicted RBP17.19■□□□□ 0.34
DNMT1-221ENST00000589538 HBS1LQ9Y450 684 aaKnown RBP17.19■□□□□ 0.34
DNMT1-221ENST00000589538 SLC12A8A0AV02 714 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-221ENST00000589538 F8VZ95 297 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 H0Y858 1186 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 HOXC11O43248 304 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-221ENST00000589538 GABBR2O75899 941 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 PLA2G5P39877 138 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 GALK1P51570 392 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 CCR3P51677 355 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 POLR2FP61218 127 aaKnown RBP17.18■□□□□ 0.34
DNMT1-221ENST00000589538 NHLH1Q02575 133 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 PDCLQ13371 301 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 SYCP1Q15431 976 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 LY6G5CQ5SRR4 150 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 RHBDF2Q6PJF5 856 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 SPEM1Q8N4L4 309 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 NDRG1Q92597 394 aaKnown RBP17.18■□□□□ 0.34
DNMT1-221ENST00000589538 SPAG5Q96R06 1193 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 MIS12Q9H081 205 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 PDCL3Q9H2J4 239 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 WDR35Q9P2L0 1181 aa17.18■□□□□ 0.34
DNMT1-221ENST00000589538 E5RJQ4 531 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 PIK3R2O00459 728 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 GREM1O60565 184 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 ATG13O75143 517 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 ATP1A3P13637 1013 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 CHKAP35790 457 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 HARS2P49590 506 aaKnown RBP17.17■□□□□ 0.34
DNMT1-221ENST00000589538 ZNF528Q3MIS6 628 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 FSTL4Q6MZW2 842 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 Q6ZNB5 142 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 NUDT18Q6ZVK8 323 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 APTXQ7Z2E3 356 aaKnown RBP17.17■□□□□ 0.34
DNMT1-221ENST00000589538 ZNF677Q86XU0 584 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 FMNL3Q8IVF7 1028 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 SCUBE3Q8IX30 993 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 TMEM35BQ8NCS4 154 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 EDEM1Q92611 657 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 FAM149B1Q96BN6 582 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 CHFRQ96EP1 664 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 PPP1R13BQ96KQ4 1090 aa17.17■□□□□ 0.34
DNMT1-221ENST00000589538 WDFY4Q6ZS81 3184 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 SCAMP3O14828 347 aaKnown RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 LATS1O95835 1130 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 GLI1P08151 1106 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 PNMA6AP0CW24 399 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 NCAM1P13591 858 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 CYP11B1P15538 503 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 CORO1AP31146 461 aaKnown RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 OPRD1P41143 372 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 STAT1P42224 750 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 MTAPQ13126 283 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 IQCB1Q15051 598 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 TRIP4Q15650 581 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 ZSCAN23Q3MJ62 389 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 ZC3H14Q6PJT7 736 aaKnown RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 MSANTD4Q8NCY6 345 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 IPO4Q8TEX9 1081 aaKnown RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 WBP2Q969T9 261 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 XPO6Q96QU8 1125 aaKnown RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 PNKPQ96T60 521 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 FAM126AQ9BYI3 521 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 PRMT8Q9NR22 394 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-221ENST00000589538 CYTH4Q9UIA0 394 aa17.16■□□□□ 0.34
DNMT1-221ENST00000589538 PAPSS1O43252 624 aaPredicted RBP17.15■□□□□ 0.34
DNMT1-221ENST00000589538 LSM8O95777 96 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms