RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 PRPF3O43395 683 aaKnown RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 PRAMEF10O60809 474 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 PSMD10O75832 226 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 JMJD7P0C870 316 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 KCNE1P15382 129 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 DGKAP23743 735 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 CD82P27701 267 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 ARL2P36404 184 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 GPR15P49685 360 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 ATP1A2P50993 1020 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 SLC7A9P82251 487 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 SSRP1Q08945 709 aaKnown RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 ZRSR2Q15696 482 aaKnown RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 INPP5JQ15735 1006 aaPredicted RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 IMMTQ16891 758 aaKnown RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 XKR9Q5GH70 373 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 SDHAF4Q5VUM1 108 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 EEF1DP3Q658K8 133 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 PPP1R18Q6NYC8 613 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 SPATS2Q86XZ4 545 aaKnown RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 TGIF2LYQ8IUE0 185 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 FAM9BQ8IZU0 186 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 KCTD17Q8N5Z5 321 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 OR10T2Q8NGX3 314 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 WDR48Q8TAF3 677 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 XPO6Q96QU8 1125 aaKnown RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 EPAS1Q99814 870 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 CCDC94Q9BW85 323 aaPredicted RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 ZCWPW1Q9H0M4 648 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 EPB41L5Q9HCM4 733 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 PREBQ9HCU5 417 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 ABI2Q9NYB9 513 aaPredicted RBP7.4□□□□□ -1.22
TPM4-210ENST00000588507 CFAP97Q9P2B7 532 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 PISDQ9UG56 409 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 CPQQ9Y646 472 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 U3KQA8 63 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 CPED1A4D0V7 1026 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 LRRIQ4A6NIV6 560 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 TMX2-CTNND1H3BSU7 103 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 SH2B2O14492 632 aaPredicted RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 WNT9AO14904 365 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 MAGEC1O60732 1142 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 PRPF40AO75400 957 aaKnown RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 SIX3O95343 332 aaPredicted RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 RLBP1P12271 317 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 HGFP14210 728 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 COX6B1P14854 86 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 KLK2P20151 261 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 SSTR2P30874 369 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 AARSP49588 968 aaKnown RBP eCLIP7.39□□□□□ -1.23
TPM4-210ENST00000588507 PDX1P52945 283 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 ZNF177Q13360 481 aaPredicted RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 BMT2Q1RMZ1 405 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 CEP135Q66GS9 1140 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 TYW1BQ6NUM6 668 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 B3GNT9Q6UX72 402 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 EFL1Q7Z2Z2 1120 aaKnown RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 TMPRSS9Q7Z410 1059 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 APBB1IPQ7Z5R6 666 aaPredicted RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 DDX42Q86XP3 938 aaKnown RBP eCLIP7.39□□□□□ -1.239e-6■□□□□ 9.6
TPM4-210ENST00000588507 TMEM25Q86YD3 366 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 ZBTB8OSQ8IWT0 167 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 JPH3Q8WXH2 748 aaPredicted RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 NDRG1Q92597 394 aaKnown RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 GJA10Q969M2 543 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 CENPTQ96BT3 561 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 MFRPQ9BY79 579 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 STRADBQ9C0K7 418 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 EBF2Q9HAK2 575 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 SPHK2Q9NRA0 654 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 GJB4Q9NTQ9 266 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 UCKL1Q9NWZ5 548 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 THAP10Q9P2Z0 257 aaPredicted RBP7.39□□□□□ -1.23
TPM4-210ENST00000588507 KCND3Q9UK17 655 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 ANAPC1Q9H1A4 1944 aa7.39□□□□□ -1.23
TPM4-210ENST00000588507 ZNF469Q96JG9 3925 aaPredicted RBP7.38□□□□□ -1.23
TPM4-210ENST00000588507 FAM47DPA6NHR8 397 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.38□□□□□ -1.23
TPM4-210ENST00000588507 CAPN5O15484 640 aaPredicted RBP7.38□□□□□ -1.23
TPM4-210ENST00000588507 NKX2-8O15522 239 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 DDAH1O94760 285 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 SNRPB2P08579 225 aaKnown RBP7.38□□□□□ -1.23
TPM4-210ENST00000588507 GIMD1P0DJR0 217 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 LIFP15018 202 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 FOSL1P15407 271 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 VARSP26640 1264 aaKnown RBP7.38□□□□□ -1.23
TPM4-210ENST00000588507 YWHABP31946 246 aaKnown RBP7.38□□□□□ -1.23
TPM4-210ENST00000588507 MFAP1P55081 439 aaKnown RBP7.38□□□□□ -1.23
TPM4-210ENST00000588507 CDH8P55286 799 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 PER3P56645 1201 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 KRTAP10-9P60411 292 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 ADAM9Q13443 819 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 ENPP2Q13822 863 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 SPIDRQ14159 915 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 FGL2Q14314 439 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 DDR2Q16832 855 aa7.38□□□□□ -1.23
TPM4-210ENST00000588507 DEFB109BQ30KR1 87 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms