RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CCSER2Q9H7U1 834 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 NMUR1Q9HB89 426 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 TRPV5Q9NQA5 729 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 OSER1Q9NX31 292 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 MARCH2Q9P0N8 246 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 TBC1D14Q9P2M4 693 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SLC12A6Q9UHW9 1150 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 LCMT1Q9UIC8 334 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 LSM7Q9UK45 103 aaKnown RBP9.48□□□□□ -0.89
CIRBP-218ENST00000588344 STAP1Q9ULZ2 295 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 PAXBP1Q9Y5B6 917 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 CPQQ9Y646 472 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 NUMBLQ9Y6R0 609 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 SCINQ9Y6U3 715 aa9.48□□□□□ -0.89
CIRBP-218ENST00000588344 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 A0A087X0T9 212 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 LEFTY2O00292 366 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 ZNF263O14978 683 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 CHADO15335 359 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 LATS1O95835 1130 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 H2AFZP0C0S5 128 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 FAM228BP0C875 321 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 FECHP22830 423 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 FCARP24071 287 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 HARS2P49590 506 aaKnown RBP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 GPC5P78333 572 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 AMPD2Q01433 879 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 RING1Q06587 406 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 FCHO2Q0JRZ9 810 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 PTP4A2Q12974 167 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 PDGFRLQ15198 375 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SPA17Q15506 151 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 ARHGAP29Q52LW3 1261 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 DCAF6Q58WW2 860 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 STXBP5Q5T5C0 1151 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 NUGGCQ68CJ6 796 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 TANGO2Q6ICL3 276 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 DNAJC24Q6P3W2 148 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 HTR3DQ70Z44 454 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 H2AFVQ71UI9 128 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SND1Q7KZF4 910 aaKnown RBP eCLIP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 TXLNBQ8N3L3 684 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 CCDC112Q8NEF3 446 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SH3RF2Q8TEC5 729 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 CLEC4CQ8WTT0 213 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 NDRG1Q92597 394 aaKnown RBP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 EDEM1Q92611 657 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 FGF14Q92915 247 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 AZIN2Q96A70 460 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 PGAP3Q96FM1 320 aaPredicted RBP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SLC22A12Q96S37 553 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 CHP1Q99653 195 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 BAG1Q99933 345 aaPredicted RBP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 NCAPGQ9BPX3 1015 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 C11orf70Q9BRQ4 267 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 KLF16Q9BXK1 252 aaPredicted RBP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 IRX2Q9BZI1 471 aaPredicted RBP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SMOC2Q9H3U7 446 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.47□□□□□ -0.89
CIRBP-218ENST00000588344 TMEM59LQ9UK28 342 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 INTUQ9ULD6 942 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SORCS3Q9UPU3 1222 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 TLR6Q9Y2C9 796 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 SH3BP1Q9Y3L3 701 aa9.47□□□□□ -0.89
CIRBP-218ENST00000588344 MTCL1Q9Y4B5 1905 aaKnown RBP9.46□□□□□ -0.89
CIRBP-218ENST00000588344 SLC12A8A0AV02 714 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 TMCO5BA8MYB1 307 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 DAB1O75553 588 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 TBX18O95935 607 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 FYNP06241 537 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 PLEKP08567 350 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 SRFP11831 508 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 ALADP13716 330 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 GLULP15104 373 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 PDGFRAP16234 1089 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 SP100P23497 879 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 CHKAP35790 457 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 VIPR2P41587 438 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 PGFP49763 221 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 MLLT6P55198 1093 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 EFEMP1Q12805 493 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 NR1H3Q13133 447 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 MTF1Q14872 753 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 ACAP1Q15027 740 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 TAF5Q15542 800 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 TRIP4Q15650 581 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-218ENST00000588344 ZNF77Q15935 545 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 SLC25A52Q3SY17 297 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 PLEKHA7Q6IQ23 1121 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 DCUN1D2Q6PH85 259 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 C1orf228Q6PIY5 440 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 VITQ6UXI7 678 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 MIB1Q86YT6 1006 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 RNF135Q8IUD6 432 aa9.46□□□□□ -0.9
CIRBP-218ENST00000588344 GPIHBP1Q8IV16 184 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms