RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 TWNKQ96RR1 684 aa14.58□□□□□ -0.08
CLPTM1-208ENST00000588274 BBS2Q9BXC9 721 aa14.58□□□□□ -0.08
CLPTM1-208ENST00000588274 DMAC2Q9NW81 257 aa14.58□□□□□ -0.08
CLPTM1-208ENST00000588274 CACNA2D2Q9NY47 1150 aa14.58□□□□□ -0.08
CLPTM1-208ENST00000588274 USP36Q9P275 1121 aaKnown RBP14.58□□□□□ -0.08
CLPTM1-208ENST00000588274 GPSM3Q9Y4H4 160 aa14.58□□□□□ -0.08
CLPTM1-208ENST00000588274 APC2O95996 2303 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 MDM4O15151 490 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 PPP6R2O75170 966 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 PENKP01210 267 aaPredicted RBP14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 NDST1P52848 882 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 BNC1Q01954 994 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 GRIK2Q13002 908 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 SLC14A1Q13336 389 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 TRPC3Q13507 836 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 ACAP1Q15027 740 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 ZACNQ401N2 412 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 CLEC20AQ6ZU45 233 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 HDDC3Q8N4P3 179 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 C12orf29Q8N999 325 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 BAHD1Q8TBE0 780 aaPredicted RBP14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 ADAMTS14Q8WXS8 1223 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 TNIP3Q96KP6 325 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 MKRN2Q9H000 416 aaKnown RBP14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 FAM49BQ9NUQ9 324 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 SCML2Q9UQR0 700 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 CKAP5Q14008 2032 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 ATP8B3O60423 1300 aa14.57□□□□□ -0.08
CLPTM1-208ENST00000588274 KCNJ18B7U540 433 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 GFRA2O00451 464 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 SPTLC2O15270 562 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 KLRC4O43908 158 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 KLKB1P03952 638 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 FTH1P19P0C7X4 201 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 ACO1P21399 889 aaKnown RBP14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 ATXN3P54252 364 aaPredicted RBP14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 MAP3K7CLP57077 242 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 INCA1Q0VD86 236 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 KNOP1Q1ED39 458 aaKnown RBP14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 FUT11Q495W5 492 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 PREPLQ4J6C6 727 aaPredicted RBP14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 ZNF667Q5HYK9 610 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 FYB2Q5VWT5 728 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 KLHDC10Q6PID8 442 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 TPGS1Q6ZTW0 290 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 SCD5Q86SK9 330 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 GLRX5Q86SX6 157 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 METTL3Q86U44 580 aaKnown RBP14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 NAXDQ8IW45 347 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 KIAA0895Q8NCT3 520 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 C1orf216Q8TAB5 229 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 DNASE2BQ8WZ79 361 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 INTS4Q96HW7 963 aaKnown RBP14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 MED10Q9BTT4 135 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 LRRC27Q9C0I9 530 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 BLZF1Q9H2G9 400 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 SLC39A2Q9NP94 309 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.56□□□□□ -0.081e-7■■■□□ 16
CLPTM1-208ENST00000588274 TOR4AQ9NXH8 423 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 WSB2Q9NYS7 404 aaPredicted RBP14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 NFE2L3Q9Y4A8 694 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 ADAMTS20P59510 1910 aa14.56□□□□□ -0.08
CLPTM1-208ENST00000588274 PTPRBP23467 1997 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 STC2O76061 302 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 DKK1O94907 266 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 ASS1P00966 412 aaKnown RBP14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 IGLV3-19P01714 112 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 C7P10643 843 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 MAOBP27338 520 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 DGKGP49619 791 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 SCAPQ12770 1279 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 CUL4BQ13620 913 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 HNRNPDQ14103 355 aaKnown RBP14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 TRIP6Q15654 476 aaKnown RBP14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 GEN1Q17RS7 908 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 PLEKHG6Q3KR16 790 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 SPOPLQ6IQ16 392 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 KCTD10Q9H3F6 313 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 FBXO44Q9H4M3 255 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 ZSCAN16Q9H4T2 348 aaPredicted RBP14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 IL21RQ9HBE5 538 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 TLR8Q9NR97 1041 aaKnown RBP14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 WDR35Q9P2L0 1181 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 CGNQ9P2M7 1197 aaKnown RBP14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 TFIP11Q9UBB9 837 aaKnown RBP14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 NUDT5Q9UKK9 219 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 PCOLCE2Q9UKZ9 415 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 SLC27A6Q9Y2P4 619 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 SLCO1B1Q9Y6L6 691 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 STON1Q9Y6Q2 735 aa14.55□□□□□ -0.08
CLPTM1-208ENST00000588274 GCN1Q92616 2671 aaKnown RBP14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 STX6O43752 255 aa14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 EXOC3O60645 756 aa14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 YEATS4O95619 227 aa14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 SYPP08247 313 aa14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 CD6P30203 668 aa14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 ATP5C1P36542 298 aaKnown RBP14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 IL12RB1P42701 662 aa14.54□□□□□ -0.08
CLPTM1-208ENST00000588274 AP3M2P53677 418 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms