RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 POLMQ9NP87 494 aaPredicted RBP19.77■□□□□ 0.76
TRIM47-205ENST00000587774 DNAJC17Q9NVM6 304 aaKnown RBP19.77■□□□□ 0.76
TRIM47-205ENST00000587774 NAGPAQ9UK23 515 aa19.77■□□□□ 0.76
TRIM47-205ENST00000587774 CACNA1EQ15878 2313 aa19.77■□□□□ 0.76
TRIM47-205ENST00000587774 TCRBV21S2A2A0A5A6 115 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 CACNG3O60359 315 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 STX10O60499 249 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 CAVIN2O95810 425 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 TYRP14679 529 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 KCNA4P22459 653 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 PMS1P54277 932 aaKnown RBP19.76■□□□□ 0.75
TRIM47-205ENST00000587774 RAD23BP54727 409 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 PREPLQ4J6C6 727 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-205ENST00000587774 COBLL1Q53SF7 1204 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 C10orf120Q5SQS8 335 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 TCERG1LQ5VWI1 586 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 TPGS1Q6ZTW0 290 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 ZC3H3Q8IXZ2 948 aaKnown RBP19.76■□□□□ 0.75
TRIM47-205ENST00000587774 HMGB4Q8WW32 186 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 RLN3Q8WXF3 142 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 TATDN2Q93075 761 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 HEXIM2Q96MH2 286 aaKnown RBP19.76■□□□□ 0.75
TRIM47-205ENST00000587774 GSDMAQ96QA5 445 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 MARK1Q9P0L2 795 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 BCCIPQ9P287 314 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRIM47-205ENST00000587774 DNMT3LQ9UJW3 386 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 HCN2Q9UL51 889 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 USP3Q9Y6I4 520 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 CEP295Q9C0D2 2601 aa19.76■□□□□ 0.75
TRIM47-205ENST00000587774 TRIM49BA6NDI0 452 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 TM4SF5O14894 197 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 SLC16A3O15427 465 aaKnown RBP19.75■□□□□ 0.75
TRIM47-205ENST00000587774 STC2O76061 302 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 P2RY2P41231 377 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 PSEN1P49768 467 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 GRAMD4Q6IC98 578 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 Q6ZNB5 142 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 MIB1Q86YT6 1006 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 TTC39CQ8N584 583 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 FRMD1Q8N878 549 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 ENGASEQ8NFI3 743 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 DDX1Q92499 740 aaKnown RBP19.75■□□□□ 0.75
TRIM47-205ENST00000587774 TMEM176AQ96HP8 235 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 SPACA7Q96KW9 195 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 TSG101Q99816 390 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 EDEM2Q9BV94 578 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 CIZ1Q9ULV3 898 aaPredicted RBP19.75■□□□□ 0.75
TRIM47-205ENST00000587774 USP24Q9UPU5 2620 aa19.75■□□□□ 0.75
TRIM47-205ENST00000587774 TMEM131Q92545 1883 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 LNP1A1A4G5 178 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 GOLGA6L4A6NEF3 574 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 PLA2G4AP47712 749 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 EGFLAMQ63HQ2 1017 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 RNF43Q68DV7 783 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 ANKRD40Q6AI12 368 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 TOGARAM2Q6ZUX3 1019 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 CYP2U1Q7Z449 544 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 TRMT11Q7Z4G4 463 aaKnown RBP19.74■□□□□ 0.75
TRIM47-205ENST00000587774 SPATA20Q8TB22 786 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 KCNV2Q8TDN2 545 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 BHMTQ93088 406 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 XPO6Q96QU8 1125 aaKnown RBP19.74■□□□□ 0.75
TRIM47-205ENST00000587774 FAM124BQ9H5Z6 455 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-205ENST00000587774 CLIC5Q9NZA1 410 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 RASAL2Q9UJF2 1139 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 STARD13Q9Y3M8 1113 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 ASPMQ8IZT6 3477 aa19.74■□□□□ 0.75
TRIM47-205ENST00000587774 HOXB2P14652 356 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 WASP42768 502 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 DHPSP49366 369 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-205ENST00000587774 FKBP3Q00688 224 aaKnown RBP19.73■□□□□ 0.75
TRIM47-205ENST00000587774 RAB41Q5JT25 222 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 ARHGAP17Q68EM7 881 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 NUDT18Q6ZVK8 323 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 TADA2BQ86TJ2 420 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 PIGZQ86VD9 579 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 PGBD3Q8N328 593 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 ZNF276Q8N554 614 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 SMARCE1Q969G3 411 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 P2RY11Q96G91 374 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 CNTNAP3BQ96NU0 1288 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 CNTNAP3Q9BZ76 1288 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 WDR35Q9P2L0 1181 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 MBD1Q9UIS9 605 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-205ENST00000587774 COQ4Q9Y3A0 265 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 PCNX2A6NKB5 2137 aa19.73■□□□□ 0.75
TRIM47-205ENST00000587774 PATE3B3GLJ2 98 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 PRRT4C9JH25 899 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 SMC2O95347 1197 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 KLKB1P03952 638 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 RALAP11233 206 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 GABRG2P18507 467 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 NTSR1P30989 418 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 LRRC63Q05C16 580 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 EFEMP1Q12805 493 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 CUL2Q13617 745 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 BECN1Q14457 450 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 MAP7D1Q3KQU3 841 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 SLC35C1Q96A29 364 aa19.72■□□□□ 0.75
TRIM47-205ENST00000587774 CDK5RAP1Q96SZ6 601 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms