RNA–Protein interactions for RNA: ENST00000587175.1

CACTIN-205, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 2,216 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-205ENST00000587175 KCNN4O15554 427 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 GABBR2O75899 941 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 IL4RP24394 825 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 NRLP54845 237 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 DNAJC3Q13217 504 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 SETDB1Q15047 1291 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 UBXN11Q5T124 520 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 NME8Q8N427 588 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 CLEC4CQ8WTT0 213 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 FAF2Q96CS3 445 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 TNIP3Q96KP6 325 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 CYLDQ9NQC7 956 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 ZMYND8Q9ULU4 1186 aaPredicted RBP21.53■■□□□ 1.04
CACTIN-205ENST00000587175 IPPQ9Y573 584 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 HGSO14964 777 aaPredicted RBP21.53■■□□□ 1.04
CACTIN-205ENST00000587175 ZBED1O96006 694 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 RPSAP08865 295 aaKnown RBP21.53■■□□□ 1.04
CACTIN-205ENST00000587175 HUNKP57058 714 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 CA9Q16790 459 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 XKR4Q5GH76 650 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 SLC9A4Q6AI14 798 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 PQLC3Q8N755 202 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 PCDH19Q8TAB3 1148 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 SLC2A14Q8TDB8 520 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 NSMCE1Q8WV22 266 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 RAB3IPQ96QF0 476 aaPredicted RBP21.53■■□□□ 1.04
CACTIN-205ENST00000587175 USH1CQ9Y6N9 552 aa21.53■■□□□ 1.04
CACTIN-205ENST00000587175 A8MUI8 341 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 ATP5HO75947 161 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 SCNN1AP37088 669 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 PDK4Q16654 411 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 ZNF618Q5T7W0 954 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 TWF2Q6IBS0 349 aaKnown RBP21.52■■□□□ 1.04
CACTIN-205ENST00000587175 ADGRF2Q8IZF7 708 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 ACSS3Q9H6R3 686 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 RRAGCQ9HB90 399 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 ETNK1Q9HBU6 452 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 Q9Y3F1 56 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 CHADO15335 359 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 TSHRP16473 764 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 SOX4Q06945 474 aaPredicted RBP21.52■■□□□ 1.04
CACTIN-205ENST00000587175 MTM1Q13496 603 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 ARCQ7LC44 396 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 C4orf33Q8N1A6 199 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 MYLK2Q9H1R3 596 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 DHX35Q9H5Z1 703 aaKnown RBP21.52■■□□□ 1.04
CACTIN-205ENST00000587175 KIF9Q9HAQ2 790 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 CHMP2BQ9UQN3 213 aa21.52■■□□□ 1.04
CACTIN-205ENST00000587175 PCNTO95613 3336 aa21.52■■□□□ 1.03
CACTIN-205ENST00000587175 ZNF487B1APH4 448 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 RGS2P41220 211 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 CLNS1AP54105 237 aaKnown RBP21.51■■□□□ 1.03
CACTIN-205ENST00000587175 SLC8A3P57103 927 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 KCNJ11Q14654 390 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 HSFY1Q96LI6 401 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 USP29Q9HBJ7 922 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 RAB6BQ9NRW1 208 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 TFE3P19532 575 aaPredicted RBP21.51■■□□□ 1.03
CACTIN-205ENST00000587175 CYP2F1P24903 491 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 RBL1P28749 1068 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 RPA3P35244 121 aaPredicted RBP21.51■■□□□ 1.03
CACTIN-205ENST00000587175 LRRC8CQ8TDW0 803 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 SPOCK2Q92563 424 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 ERP27Q96DN0 273 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 LRRC37BQ96QE4 947 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 PAFAH2Q99487 392 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 NRDE2Q9H7Z3 1164 aa21.51■■□□□ 1.03
CACTIN-205ENST00000587175 BCLAF3A2AJT9 711 aaKnown RBP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 EDF1O60869 148 aaKnown RBP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 WFS1O76024 890 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 ZFXP17010 805 aaPredicted RBP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 CA4P22748 312 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 RPL34P49207 117 aaKnown RBP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 EFTUD2Q15029 972 aaKnown RBP eCLIP21.5■■□□□ 1.031e-7■■■■■ 52.3
CACTIN-205ENST00000587175 DPYSL2Q16555 572 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 FSCN1Q16658 493 aaKnown RBP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 SMG8Q8ND04 991 aaKnown RBP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 RTP4Q96DX8 246 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 WDR83Q9BRX9 315 aaKnown RBP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 KLC2Q9H0B6 622 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 LRMDAQ9H2I8 198 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.5■■□□□ 1.03
CACTIN-205ENST00000587175 GRID1Q9ULK0 1009 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 AP4E1Q9UPM8 1137 aa21.5■■□□□ 1.03
CACTIN-205ENST00000587175 TYROBPO43914 113 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 DCTN3O75935 186 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 MAP3K6O95382 1288 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 ALDH3A1P30838 453 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 L1CAMP32004 1257 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 ELK3P41970 407 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 LILRA4P59901 499 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 EFHC1Q5JVL4 640 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 SYCP2LQ5T4T6 812 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 ADGRD1Q6QNK2 874 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 CDKL3Q8IVW4 592 aaPredicted RBP21.49■■□□□ 1.03
CACTIN-205ENST00000587175 TOP6BLQ8N6T0 577 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 B3GALNT2Q8NCR0 500 aa21.49■■□□□ 1.03
CACTIN-205ENST00000587175 CENPIQ92674 756 aaPredicted RBP21.49■■□□□ 1.03
CACTIN-205ENST00000587175 FRMD8Q9BZ67 464 aaPredicted RBP21.49■■□□□ 1.03
CACTIN-205ENST00000587175 SLCO1B3Q9NPD5 702 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms