RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 PHF13Q86YI8 300 aaPredicted RBP16.9■□□□□ 0.3
ATG4D-205ENST00000586477 MAML2Q8IZL2 1156 aaPredicted RBP16.9■□□□□ 0.3
ATG4D-205ENST00000586477 C1orf131Q8NDD1 294 aaKnown RBP16.9■□□□□ 0.3
ATG4D-205ENST00000586477 SLC30A5Q8TAD4 765 aa16.9■□□□□ 0.3
ATG4D-205ENST00000586477 ZFYVE19Q96K21 471 aa16.9■□□□□ 0.3
ATG4D-205ENST00000586477 PPP1R13BQ96KQ4 1090 aa16.9■□□□□ 0.3
ATG4D-205ENST00000586477 KCNK16Q96T55 309 aa16.9■□□□□ 0.3
ATG4D-205ENST00000586477 CHP1Q99653 195 aa16.9■□□□□ 0.3
ATG4D-205ENST00000586477 CNGB3Q9NQW8 809 aa16.9■□□□□ 0.3
ATG4D-205ENST00000586477 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
ATG4D-205ENST00000586477 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
ATG4D-205ENST00000586477 FAM170BA6NMN3 283 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.29
ATG4D-205ENST00000586477 CHADO15335 359 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 CALCAP01258 141 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 PLEKP08567 350 aaPredicted RBP16.89■□□□□ 0.29
ATG4D-205ENST00000586477 PPP3CCP48454 512 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 RPL34P49207 117 aaKnown RBP16.89■□□□□ 0.29
ATG4D-205ENST00000586477 KRT83P78385 493 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
ATG4D-205ENST00000586477 UBXN2BQ14CS0 331 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 ARHGAP15Q53QZ3 475 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 ALKBH5Q6P6C2 394 aaKnown RBP16.89■□□□□ 0.29
ATG4D-205ENST00000586477 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 TMEM110Q86TL2 294 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 CMTM8Q8IZV2 173 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 SCML4Q8N228 414 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 ARHGAP18Q8N392 663 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 MAB21L3Q8N8X9 362 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 GOLGA1Q92805 767 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 IRF7Q92985 503 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 USP13Q92995 863 aaPredicted RBP16.89■□□□□ 0.29
ATG4D-205ENST00000586477 E2F7Q96AV8 911 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 CLDN23Q96B33 292 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 SLITRK1Q96PX8 696 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 SLC22A12Q96S37 553 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 SLC4A5Q9BY07 1137 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 OSBPL6Q9BZF3 934 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 OBP2AQ9NY56 170 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 NAGPAQ9UK23 515 aa16.89■□□□□ 0.29
ATG4D-205ENST00000586477 A0A087X0T9 212 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 EIF3CLB5ME19 914 aaKnown RBP16.88■□□□□ 0.29
ATG4D-205ENST00000586477 ZNF263O14978 683 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 NDUFA10O95299 355 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 FAM228BP0C875 321 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 MMP8P22894 467 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 SCNN1AP37088 669 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 PSEN1P49768 467 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 SLC5A3P53794 718 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 ASTE1Q2TB18 679 aaPredicted RBP16.88■□□□□ 0.29
ATG4D-205ENST00000586477 RAB41Q5JT25 222 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 CCDC122Q5T0U0 273 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 PMF1Q6P1K2 205 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 MON1AQ86VX9 555 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 ZMIZ2Q8NF64 920 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 CPA5Q8WXQ8 436 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 IRGQQ8WZA9 623 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 C18orf8Q96DM3 657 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 GCNAQ96QF7 691 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 EIF3CQ99613 913 aaKnown RBP16.88■□□□□ 0.29
ATG4D-205ENST00000586477 ISCUQ9H1K1 167 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 ADAM22Q9P0K1 906 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 INTUQ9ULD6 942 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 EPN1Q9Y6I3 576 aaPredicted RBP16.88■□□□□ 0.29
ATG4D-205ENST00000586477 ZNF292O60281 2723 aa16.88■□□□□ 0.29
ATG4D-205ENST00000586477 TNFRSF10BO14763 440 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 BEST1O76090 585 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 LCA5LO95447 670 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 YWHAQP27348 245 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 GABRB2P47870 512 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 SOX9P48436 509 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 TKTL1P51854 596 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 GFPT1Q06210 699 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-205ENST00000586477 ADIGQ0VDE8 80 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 ASCL5Q7RTU5 278 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 WDTC1Q8N5D0 677 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 NKD2Q969F2 451 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-205ENST00000586477 PCDHB18PQ96TA0 734 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 TTLL2Q9BWV7 592 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 ZMYM5Q9UJ78 669 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 PIAS3Q9Y6X2 628 aa16.87■□□□□ 0.29
ATG4D-205ENST00000586477 PTPRZ1P23471 2315 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-205ENST00000586477 C2orf78A6NCI8 922 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 PRR23AA6NEV1 266 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 SOWAHDA6NJG2 315 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 HHLA1C9JL84 531 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 ZBED1O96006 694 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 FTLP02792 175 aaPredicted RBP16.86■□□□□ 0.29
ATG4D-205ENST00000586477 GLI1P08151 1106 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 H2AFZP0C0S5 128 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 DESP17661 470 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 DDX6P26196 483 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATG4D-205ENST00000586477 RGS7P49802 495 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 GSCP56915 257 aaPredicted RBP16.86■□□□□ 0.29
ATG4D-205ENST00000586477 TNK2Q07912 1038 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 ZNF268Q14587 947 aaPredicted RBP16.86■□□□□ 0.29
ATG4D-205ENST00000586477 EFHC1Q5JVL4 640 aa16.86■□□□□ 0.29
ATG4D-205ENST00000586477 TXNDC11Q6PKC3 985 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms