RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 FRMD1Q8N878 549 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 MLKLQ8NB16 471 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 ERCC4Q92889 916 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 ZDHHC5Q9C0B5 715 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 DPEP3Q9H4B8 488 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 TLR8Q9NR97 1041 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 DNAAF2Q9NVR5 837 aaKnown RBP11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 IL37Q9NZH6 218 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 MAN1B1Q9UKM7 699 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 NUP205Q92621 2012 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 IGF2RP11717 2491 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 IGHV1OR15-9A0A0B4J2B8 117 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 PVALEFA0A1B0GWK0 134 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 FAM221BA6H8Z2 402 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 TLR5O60602 858 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 EXOC3O60645 756 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 AP1G2O75843 785 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 IRF1P10914 325 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 BMP6P22004 513 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 ATP5C1P36542 298 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 WASP42768 502 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 AFMP43652 599 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 ZNF165P49910 485 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 CACNA2D1P54289 1103 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 RING1Q06587 406 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 IQCB1Q15051 598 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 PLEKHG6Q3KR16 790 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 HTR3DQ70Z44 454 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 TMEM25Q86YD3 366 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 CHCHD4Q8N4Q1 142 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 SCAMP5Q8TAC9 235 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 GOLGA5Q8TBA6 731 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 ZFRQ96KR1 1074 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 HSPA12BQ96MM6 686 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 KCNK16Q96T55 309 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 BBS2Q9BXC9 721 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 DNAI2Q9GZS0 605 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 CCSER2Q9H7U1 834 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 VRTNQ9H8Y1 702 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 GMIPQ9P107 970 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 KLK13Q9UKR3 277 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 CYP8B1Q9UNU6 501 aa11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 ASCC3Q8N3C0 2202 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-226ENST00000585026 PCNX2A6NKB5 2137 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 A0A1W2PQF6 199 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 FAM92AA1XBS5 289 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 NEDD8-MDP1E9PL57 170 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 NPC1O15118 1278 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 CLIC2O15247 247 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 TGFB1I1O43294 461 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 KLRC4O43908 158 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 CACNG3O60359 315 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 RPN1P04843 607 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 ZDHHC11BP0C7U3 371 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 TYRP14679 529 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 ZNF132P52740 706 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 CUL4BQ13620 913 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 STARD3Q14849 445 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 TRIP6Q15654 476 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 EGFLAMQ63HQ2 1017 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 EPM2AIP1Q7L775 607 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 RAB44Q7Z6P3 723 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 TADA2BQ86TJ2 420 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 C12orf56Q8IXR9 622 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 UCMAQ8WVF2 138 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 HPS3Q969F9 1004 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 ZNF419Q96HQ0 510 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 GABRG3Q99928 467 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 XYLT2Q9H1B5 865 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 CBX8Q9HC52 389 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 KRT82Q9NSB4 513 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 TMEM30AQ9NV96 361 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 MARK1Q9P0L2 795 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 DACH1Q9UI36 760 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 APOBEC2Q9Y235 224 aaKnown RBP11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 NFE2L3Q9Y4A8 694 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 NME7Q9Y5B8 376 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 ANAPC1Q9H1A4 1944 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 CACNA1EQ15878 2313 aa11.32□□□□□ -0.6
CSNK1D-226ENST00000585026 IKBKBO14920 756 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 CD59P13987 128 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 NDUFV2P19404 249 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 CD6P30203 668 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 HOXD13P35453 343 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 PLA2G4AP47712 749 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 DGKGP49619 791 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 NCOA4Q13772 614 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 SGSM1Q2NKQ1 1148 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 DPCR1Q3MIW9 517 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
CSNK1D-226ENST00000585026 ZNF658Q5TYW1 1059 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms