RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	RXFP3	Q9NSD7	469 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	CLIC5	Q9NZA1	410 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	TBC1D14	Q9P2M4	693 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	HESX1	Q9UBX0	185 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	DACH1	Q9UI36	760 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	NAGPA	Q9UK23	515 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	SH3BP1	Q9Y3L3	701 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	ZFHX4	Q86UP3	3567 aa		13.99	□□□□□ -0.17
SREBF1-223	ENST00000584760	MDM4	O15151	490 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	CALCA	P01258	141 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	IRF1	P10914	325 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	BRD2	P25440	801 aa	Known RBP	13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	PXN	P49023	591 aa	Predicted RBP	13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	TKTL1	P51854	596 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	ADIG	Q0VDE8	80 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	DHCR24	Q15392	516 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	MAN2A1	Q16706	1144 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	PM20D1	Q6GTS8	502 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	RHBDF2	Q6PJF5	856 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	WDR5B	Q86VZ2	330 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	BBS7	Q8IWZ6	715 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	UBA3	Q8TBC4	463 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	EXOC4	Q96A65	974 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	CRACR2A	Q9BSW2	395 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	ULBP1	Q9BZM6	244 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	DNMT3L	Q9UJW3	386 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760	NUDT5	Q9UKK9	219 aa		13.98	□□□□□ -0.17
SREBF1-223	ENST00000584760		M0QYV0	167 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	TM4SF5	O14894	197 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	RNF40	O75150	1001 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	ZBED1	O96006	694 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	ADH1C	P00326	375 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	ZNF806	P0C7X5	589 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	SLC9A1	P19634	815 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	HOXA6	P31267	233 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	EIF2D	P41214	584 aa	Known RBP	13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	MTIF2	P46199	727 aa	Known RBP	13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	LIMK1	P53667	647 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	APBA1	Q02410	837 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	STIL	Q15468	1287 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	CNGA2	Q16280	664 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	TPD52L1	Q16890	204 aa	Predicted RBP	13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	C10orf120	Q5SQS8	335 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	STPG1	Q5TH74	334 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	GJB7	Q6PEY0	223 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	GBP6	Q6ZN66	633 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	HTR3D	Q70Z44	454 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	ENOSF1	Q7L5Y1	443 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	TADA2B	Q86TJ2	420 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	KBTBD6	Q86V97	674 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	C12orf40	Q86WS4	652 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	CREBRF	Q8IUR6	639 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	FAM114A1	Q8IWE2	563 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	ARHGAP18	Q8N392	663 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	SLC35F5	Q8WV83	523 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	KCTD13	Q8WZ19	329 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	SMOC1	Q9H4F8	434 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	LRRC4	Q9HBW1	653 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	APEX2	Q9UBZ4	518 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	USP24	Q9UPU5	2620 aa		13.97	□□□□□ -0.17
SREBF1-223	ENST00000584760	MYO18A	Q92614	2054 aa	Known RBP	13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	GOLGA6L22	H0YM25	854 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	HOXC11	O43248	304 aa	Predicted RBP	13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	RPP40	O75818	363 aa	Known RBP	13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	GABBR2	O75899	941 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	CHRM1	P11229	460 aa	Predicted RBP	13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	RALA	P11233	206 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	ADH5	P11766	374 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	PON1	P27169	355 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	YWHAG	P61981	247 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	GOLGA8F	Q08AF8	430 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	GOLGA8DP	Q0D2H9	430 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	EXOC3L4	Q17RC7	722 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	FBXO43	Q4G163	708 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	MIIP	Q5JXC2	388 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	LY6G5C	Q5SRR4	150 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760		Q6ZNB5	142 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	CACNA2D4	Q7Z3S7	1137 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	ETFBKMT	Q8IXQ9	262 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	SCML4	Q8N228	414 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	GAB3	Q8WWW8	586 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	NDRG1	Q92597	394 aa	Known RBP	13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	SIX2	Q9NPC8	291 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	CNGB3	Q9NQW8	809 aa		13.96	□□□□□ -0.17
SREBF1-223	ENST00000584760	SPAG17	Q6Q759	2223 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	YJEFN3	A6XGL0	299 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	BECN2	A8MW95	431 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760		E7ENQ6	273 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	STC2	O76061	302 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	KRT5	P13647	590 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	SHC2	P98077	582 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	MESP2	Q0VG99	397 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	VWA3B	Q502W6	1294 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	HSP90AA4P	Q58FG1	418 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	PMF1	Q6P1K2	205 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	MIB1	Q86YT6	1006 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	SFTPA1	Q8IWL2	248 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms